Query= MSMg01no396_l19.b1 MSMg01no396_l19.b1 CHROMAT_FILE:
MSMg01no396_l19.b1 PHD_FILE: MSMg01no396_l19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:56 2005
(454 letters)
>mm_chr14_78061207_78062061
Length = 855
Score = 801 bits (414), Expect = 0.0
Identities = 442/452 (97%), Gaps = 3/452 (0%)
Strand = Plus / Minus
Query: 5 gaattctatctttgttcacagatcttgcgttcatccctacttccctttcttcctgtgtac 64
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gaattctatctttgaacagagatcttgcgttcatccctacttccctttcttcctgtgtac 596
Query: 65 agacaattgcttgaatgattataacgtctggacttttatttgaacttattttttttccct 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 595 agacaattgcttgaatgattataacgtctggacttttatttgaactta-tttttttccct 537
Query: 125 gaa--acatatatttctttgttttgcatgtatttttttctgggacactgccatgttcctt 182
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gaaacacatatatttctttgttttgcatgtatttttttctgggacactgccatgttcctt 477
Query: 183 accatttactatattttcaatatgatttctatttttagggtcggcctgtgttaacacttt 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 476 accatttactatattttcaatatgatttctatttttagggttggcctgtgttaacacttt 417
Query: 243 gtgctgcttctgtgggatatgtggacccaacttaccctatctgcccttccagtggagaat 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 416 gtgctgcttctgtgggatatgtggacccaacttacccaatctgcccttccagtggagaat 357
Query: 303 tggcacctgctgttctcccagactagacaagacggcagtggacacgccagcgcatgctcc 362
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 356 tggcacctgctgttctcccagactagacaagacggcagtggacatgccagcgcatgctcc 297
Query: 363 cttattgtcttatgggaggatttccctaagccactcttctagtcagactacttcaagggc 422
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cttattgtcttatgggaggatttccctaagccactcttctagtcagactacttcaagggt 237
Query: 423 gtgggcatgcttaaaaggtctatgttgaagct 454
||||||||||||||||||||||||||||||||
Sbjct: 236 gtgggcatgcttaaaaggtctatgttgaagct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_l19.g1 MSMg01no396_l19.g1 CHROMAT_FILE:
MSMg01no396_l19.g1 PHD_FILE: MSMg01no396_l19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:56 2005
(341 letters)
>mm_chr14_77898361_77899100
Length = 740
Score = 592 bits (306), Expect = e-173
Identities = 333/342 (97%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 1 agaaaaggcttaacagtggtgaggagttagctgtgtccttgcttatgttcataaatgtat 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaaaggcttaacagtggtggggagttagctgtgtccttgcttatgttcataaatgtat 260
Query: 61 ctatgactagcttggacagcagtggagagccaataaccttcttccagggatagctggctc 120
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctatgactagcttggatggcagtggagagccaataaccttcttccagggatagctggctc 320
Query: 121 attcttttttcccctaaggctgcacatgaagctggcctgaagccagaagtcagatttaga 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 attcttttttcccctaaggctgcacatgaagctggc-tgaagccagaagtcagatttaga 379
Query: 181 tctcttccc-aggtgaggggataggtacagggggatagtcccagaactgtttgaaatggt 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 380 tctcttccccaggtgaggggataggtacagggggatagtcccagaactgtttgaagtggt 439
Query: 240 gggcagtttactcaccatctccggagggctatgaatctcggggagtgtctgtcaagaaca 299
|||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 440 gggcagtt-actcaccatctccggagggctacgaatcttggggagtgtctgtcaagaaca 498
Query: 300 ttttggagacttctgtactgggaggaattggaactgatgagt 341
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttttggagacttctgtactgggaggaattggaactgatgagt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 740
Length adjustment: 9
Effective length of query: 332
Effective length of database: 731
Effective search space: 242692
Effective search space used: 242692
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
