Query= MSMg01no397_l10.b1 MSMg01no397_l10.b1 CHROMAT_FILE:
MSMg01no397_l10.b1 PHD_FILE: MSMg01no397_l10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:14 2005
(416 letters)
>mm_chr14_107923993_107924809
Length = 817
Score = 760 bits (393), Expect = 0.0
Identities = 411/417 (98%), Gaps = 1/417 (0%)
Strand = Plus / Plus
Query: 1 tggataaaaccaagtattccaatggttatttgcctgtttgagcagcagatttggggagct 60
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tggataaaaccaagtattccaacggttatttgcctgtttgagcagcagagttggggagct 260
Query: 61 aggaaggaattagacatagatcacagtgtatccaagatttttttcttatctggcaacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaaggaattagacatagatcacagtgtatccaagatttttttcttatctggcaacttt 320
Query: 121 ctctttaaaaggaaacttatcactctgtaatgccttctgaggacagtagtttcaaacaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctttaaaaggaaacttatcactctgtaatgccttctgaggacagtagtttcaaacaaa 380
Query: 181 ataagagggaaatcaggtatcagtcaggaacagagaagaatgtacttgcaactgtgttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ataagagggaaatcaggtatcagtcaggaacagagaagaatgtacttgcaactgtgttta 440
Query: 241 cttaattgttgttaactggttaaaagagattttgattatttttcaaattgctaaatgaca 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttaattggtgttaactggttaaaagagattttgattatttttcaaattgctaaatgaca 500
Query: 301 agtttacttttta-tgaataaaggttgatgaaaagccatcactagttctagtaaaagtga 359
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agtttactttttaatgaataaaggttgatgaaaagccatcactagttctagtaaaagtga 560
Query: 360 agatttcaatctaaaagcatagcgactattcttattatataccactttctaaagtac 416
|||||||||||||||||||||| |||| |||||||||||||||||||||||||||||
Sbjct: 561 agatttcaatctaaaagcatagtgactgttcttattatataccactttctaaagtac 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 817
Length adjustment: 9
Effective length of query: 407
Effective length of database: 808
Effective search space: 328856
Effective search space used: 328856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_l10.g1 MSMg01no397_l10.g1 CHROMAT_FILE:
MSMg01no397_l10.g1 PHD_FILE: MSMg01no397_l10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:14 2005
(427 letters)
>mm_chr14_107925967_107926793
Length = 827
Score = 617 bits (319), Expect = 0.0
Identities = 392/441 (88%), Gaps = 41/441 (9%)
Strand = Plus / Minus
Query: 1 agggacagccagggctacacagagaaaccctgtctc-----------aaaaaaaaaaaaa 49
|||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 agggacagccagggctacacagagaaaccctgtctcaaaaaaaaaaaaaaaaaaaaaaaa 682
Query: 50 aagaa--aaaaaaaaacca-caccaccaccaataataataataataataataataataat 106
||||| |||||||||||| |||||||||| |
Sbjct: 681 aagaaagaaaaaaaaaccaccaccaccacc---------------------------acc 649
Query: 107 aataataataataataataatgaaagccaattccctcttcatctcattgtgttccttaga 166
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 accaataataataataataatgaaagccaattccctcttcatctcattgtgttccttaga 589
Query: 167 attcgtcactgtgataaaaggaagacaggcatcatgtgtatgagcaggcatgtttaccag 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 attcgtcactgtgataaaaggaagacaggcatcatgtgtatgagcaggcatgtttaccag 529
Query: 227 tcctagaatcaagaatcaagacttttatcatggcattattctaggggtcagctgtctcca 286
|||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 528 tcctagaatcaagaatcaagacacttagcatggcattattctaggggtcagctgtctcca 469
Query: 287 aagcatatgtgtatggccctgtggatcaaatgtagagactcaaaagcagagaaacactgt 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 aagcatatgtgtatggccctgtggatcaaatgtagagactcaaaagcagagaaacactgt 409
Query: 347 agaactaagctatgcctttgccttttttatttttgttaaactattttcaacacagatttt 406
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 408 agaactaagctatgcctttgccttttttattttttttaaactattttcaacacagatttt 349
Query: 407 cactaagtcatctaggctagt 427
|||||||||||||||||||||
Sbjct: 348 cactaagtcatctaggctagt 328
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
