Query= MSMg01no398_g18.b1 MSMg01no398_g18.b1 CHROMAT_FILE:
MSMg01no398_g18.b1 PHD_FILE: MSMg01no398_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:08 2005
(592 letters)
>mm_chr14_100367278_100368269
Length = 992
Score = 1029 bits (532), Expect = 0.0
Identities = 568/588 (96%), Gaps = 13/588 (2%)
Strand = Plus / Plus
Query: 5 gaattcttacttttaccacctcaggaagctcatttatggggatcttaaacacatgtgtta 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttacatttaccacctcaggaagctcatttatggggatcttaaacacatgtgtta 264
Query: 65 gatgaagagatctgctgggagctggtctcagaaaagaaaatgtgaaagtacaaaccagtg 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 265 gatgaagagatctgctgggagctgatctcagaaaagaaaatgtgaaagtacaaaccagtg 324
Query: 125 tgattacagcctggggatttggaaaaaatgtaggaagcatgcccgagtactattgtccta 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 tgattacagcctggggatttggaaaaaatgtaggaagcatgcccgagtagtattgtccta 384
Query: 185 taagtgcaattacaaaattaattaaaattctaaacacttccacgaagcatggttgtcttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taagtgcaattacaaaattaattaaaattctaaacacttccacgaagcatggttgtcttc 444
Query: 245 atgtattagaaagcatgttaaaaattcactttcagtcaccacagctgaatcttctcattc 304
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 atgtattagaaagcatgttaaaaattcactttcagacaccacagctgaatcttctcattc 504
Query: 305 tgccagtttacagttgacaaagccttttgtttatccataataataatagcttggggctgc 364
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcgagtttacagttgacaaagccttttgtttatccataataataatagcttggggctgc 564
Query: 365 aaacagactttctggatcagagttccctccttgaacaatgtgttcattattagcatggtt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaacagactttctggatcagagttccctccttgaacaatgtgttcattattagcatggtt 624
Query: 425 ttcatttattattattacatatttgtatgcatgccacgttgcatgtggaggtcagaggac 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttcatttattattattacatatttgtatgcatgccacgttgcatgtggaggtcagaggac 684
Query: 485 gactcggagagtgggttctctttcataccaagctccaggggtcaaactcaggtcatcagg 544
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 685 gactcggagagtgggttctctttcataccaagctccagg-------------tcatcagg 731
Query: 545 tgtgtaccaagggattttatctgatgaactattttgcatgacttttat 592
||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 732 tgtgtaccaagggattttacctgatgaactatcttgcatgacttttat 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_g18.g1 MSMg01no398_g18.g1 CHROMAT_FILE:
MSMg01no398_g18.g1 PHD_FILE: MSMg01no398_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:08 2005
(542 letters)
>mm_chr14_100541863_100542805
Length = 943
Score = 872 bits (451), Expect = 0.0
Identities = 520/547 (95%), Gaps = 9/547 (1%)
Strand = Plus / Minus
Query: 1 atttccttacagtgtctgagatagcccacatttcatgcacctcattctccattttctcag 60
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 743 atttccttacagtgtctgagatagcctacatttcgtgcacctcattctccattttctcag 684
Query: 61 ctatctgttctgggcttgttctcaattgtggcatcctcctggctcgctttctcaatctca 120
|||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 683 ctatctgttctgggctcgttctcaattgtggcatcctcctggctcactttctcaatctca 624
Query: 121 cctccacggaaatgatcaccgggatggctttgaactcagttaagtgatacacagcaacct 180
|||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 623 cctccatggaaatgatcaccgggatggctttgaactcacttaagtgatacacagcaacct 564
Query: 181 ttttctacaatttg-atgctagtgtactgtctctgcctgcatttctattctccacaagca 239
| |||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct: 563 tcttctacaattcgaatgctagtgtcctgtctctgcctgcatttctattctccacgagca 504
Query: 240 ----ttttacgatggtggactgttcaacaactgggaccttcccttttcagggaacctggt 295
|||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 503 cccc----acgatggtggactgttcaacaactgggatcttcccttttcagggaacctggt 448
Query: 296 cgtccttccaacatcatgttataaagggcattcttgactgagcctgcaggtgtagatgac 355
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 447 cgtccttccaacatcaggttataaagggcattcttgaccgagcctgcaggtgtagatcac 388
Query: 356 gtttattttggagtcaggatcttagagctgggatggacctgatgttgtttctttcttacc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gtttattttggagtcaggatcttagagctgggatggacctgatgttgtttctttcttacc 328
Query: 416 catgccactcaatggctgaatttagaggcatgggccatagtacctagctcacatgtcacg 475
||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 327 catgccactaaatggctgaatttagaggcatgggccacagtacctagctcacatgtcacg 268
Query: 476 acttctatgtgtgtttgacattttggagaaaattctatttcctttttgcactaatgttca 535
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||
Sbjct: 267 acttctatgtgtgtttgacattttggggaaaattctattttctttttgcactaatgttca 208
Query: 536 caaacct 542
|||||||
Sbjct: 207 caaacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 943
Length adjustment: 10
Effective length of query: 532
Effective length of database: 933
Effective search space: 496356
Effective search space used: 496356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
