Query= MSMg01no398_n17.b1 MSMg01no398_n17.b1 CHROMAT_FILE:
MSMg01no398_n17.b1 PHD_FILE: MSMg01no398_n17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:43 2005
(603 letters)
>mm_chr14_13040271_13041274
Length = 1004
Score = 617 bits (319), Expect = 0.0
Identities = 343/351 (97%), Gaps = 1/351 (0%)
Strand = Plus / Minus
Query: 1 acctaaacaagaatgctaaacccacaaaactctaaagacaaaagcacaaaattaaacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acctaaacaagaatgctaaacccacaaaactctaaagacaaaagcacaaaattaaacttg 326
Query: 61 gtatggtcttcctttctaaggtgtgatcttaaaaacagcaccaacaat-aaaaaaacagg 119
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 gtatggtcttcctttctaaggtgtgatcttaaaaacagcaccaacaataaaaaaaacagg 266
Query: 120 tgaggatggatgctaacagacttttgaagagttgctttagagggcgcctttaagaaatgg 179
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 tgaggatggatgctaacagacttttgaagagttgctttagagggcgccattaagaaatgg 206
Query: 180 caaagagccgggcagttatgatgcacgcctttaatcgcagcacttaggaggcagaggcag 239
|||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 205 caaagagccgggcagtgatgatgcacgcctttaatggcagcacttgggaggcagaggcag 146
Query: 240 gcggatttctgagttcaaggccagcttggtctacaaagtgagcgccaggacagccagggc 299
|| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 145 gcagatttctgagttcaaggccagcctggtctacaaagtgagtgccaggacagccagggc 86
Query: 300 tacacagagaaatcctgtctcaaaacaccaaaacaaaaacaaaaacaaaaa 350
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 tacacagagaaatcctgtctcaaaacaccaaaacaaaaacaaaaacaaaaa 35
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_n17.g1 MSMg01no398_n17.g1 CHROMAT_FILE:
MSMg01no398_n17.g1 PHD_FILE: MSMg01no398_n17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:43 2005
(463 letters)
>mm_chr14_12860136_12860998
Length = 863
Score = 810 bits (419), Expect = 0.0
Identities = 452/463 (97%)
Strand = Plus / Plus
Query: 1 caatagaccctcagttggcctgtcttctgttcttaaggcccatagacctggtgtgcactt 60
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 201 caatagaccctcagttggcctgtcttctgttcttatggcccttagacctggtgtgcactt 260
Query: 61 cgggctcatctgctccaaaaagtagaactccaggtacaaagatgttagaagcatctttgc 120
||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 cgggctcatctactccaaaaagtagaactccaggtacaaagatgttggaagcatctttgc 320
Query: 121 attgattgcagaaagcaatgaataaagatccgggtattgtgtgctaaacagtatggtatt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attaattgcagaaagcaatgaataaagatccgggtattgtgtgctaaacagtatggtatt 380
Query: 181 aaacaagccctctgggatgtttatttgaatgtcgcgttgctgacagaaatgctgaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aaacaagccctctgggatgtttatttgaatgtcgcgttgctgacagagatgctgaatatc 440
Query: 241 tattcctcttcacaacttagttcttctaaaactactctttcaatgaaagctggctgagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 cattcctcttcacaacttagttcttctaaaactactctttcaatgaaagctgactgagcc 500
Query: 301 tataccttgggagtgactcactgggaaactggctggcatgtggaaaggatcgatgtcacc 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tataccttgggagtgactcactgggaaactggctggcatgtggaaaagatcgatgtcacc 560
Query: 361 gtaatggacacatccctctgctcgtgcagattcacaatgggaaatgtaagctgtctcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtaatggacacatccctctgctcgtgcagattcacaatgggaaatgtaagctgtctcctt 620
Query: 421 caccccgactttcccaaagcagtgcttagcatatggagctgag 463
|||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 caccccgactttcccaaagcagtgcttagcgtatggagctgag 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
