Query= MSMg01no399_h01.b1 MSMg01no399_h01.b1 CHROMAT_FILE:
MSMg01no399_h01.b1 PHD_FILE: MSMg01no399_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:27 2005
(467 letters)
>mm_chr14_21192068_21192934
Length = 867
Score = 832 bits (430), Expect = 0.0
Identities = 454/466 (97%), Gaps = 8/466 (1%)
Strand = Plus / Plus
Query: 1 aggctggcctcgaactcacagagatctgcctgcctctgcctcccaagtgctgggacttgt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 aggctggcctcgaactcacagagatctgcctgcctctgcctcccaattgctgggacttgt 260
Query: 61 accactaccaccccagctgaactacaaaaattttgaataccagtttgtttttaaaatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accactaccaccccagctgaactacaaaaattttgaataccagtttgtttttaaaatagt 320
Query: 121 gcaatgtaatttggcagttaacgacattaatgctgtgaacatccttacacatttctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaatgtaatttggcagttaacgacattaatgctgtgaacatccttacacatttctttac 380
Query: 181 atgtgtaaagtgcgcttaccaaggtggagggttggtcactgttcagtagacaacagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgtaaagtgcgcttaccaaggtggagggttggtcactgttcagtagacaacagttat 440
Query: 241 ccaaagtgatggtgactctagtgccactgctcggacacaagttctgtgctcagtcttgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaaagtgatggtgactctagtgccactgctcggacacaagttctgtgctcagtcttgtc 500
Query: 301 aatcttcttcttctagctctaatttttttgtttgtgtataaaaagacccct----ttgtg 356
|||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 501 aatcttcttcttctagctctaatttttttgtttgtgtataaaaaga----tatttttgtg 556
Query: 357 catgttttaaaactaaggtataatttgcatacagaataaactttcagcatttacttaaga 416
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 557 cacgttttaaaactaaggtataatttgcatacagaagaaactttcagcatttacttaaga 616
Query: 417 ttgtcccttttttacatttgcgtgtgtgtgtgtgtgtgcgcgcgcg 462
|||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 617 ttgtcccttttttacatttgtgtgtgtgtgtgtgtgtgcgcgcgcg 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_h01.g1 MSMg01no399_h01.g1 CHROMAT_FILE:
MSMg01no399_h01.g1 PHD_FILE: MSMg01no399_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:27 2005
(283 letters)
>mm_chr14_21358109_21358791
Length = 683
Score = 532 bits (275), Expect = e-155
Identities = 281/283 (99%)
Strand = Plus / Minus
Query: 1 ctttttttcagtaagaaactatttccagtcatatagtgtacacatttaatcccagcattt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 586 ctttttttcagtaagaaactatttacagtcatatagtgtacacatttaatcccagcattt 527
Query: 61 gggagggagacacaggagcgcttttaagttctgcctcagcctgaatgaaataggagaaac 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 526 gggagggagacacaggagcgcttttaagttctgtctcagcctgaatgaaataggagaaac 467
Query: 121 tatttaaacgagcaaatcttaaacaaacaaaactacctaaatttttgagcctggaaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tatttaaacgagcaaatcttaaacaaacaaaactacctaaatttttgagcctggaaatta 407
Query: 181 gctgtgctttgttttattgaagatgaatagtagaattaaagttttctagtagaaattaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gctgtgctttgttttattgaagatgaatagtagaattaaagttttctagtagaaattaga 347
Query: 241 agaattgaagtaatgttaacacattgcagttaaaagaaaattc 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 agaattgaagtaatgttaacacattgcagttaaaagaaaattc 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
