Query= MSMg01no399_k24.b1 MSMg01no399_k24.b1 CHROMAT_FILE:
MSMg01no399_k24.b1 PHD_FILE: MSMg01no399_k24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:46 2005
(556 letters)
>mm_chr14_110881619_110882574
Length = 956
Score = 748 bits (387), Expect = 0.0
Identities = 411/419 (98%)
Strand = Plus / Minus
Query: 1 gtatgagtgctcaaagatcttaattctaattaatcattacttctctgaaattgaaattta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gtatgagtgctcaaagatcttaattctaattaatcattacttctctgaaattgaaattta 368
Query: 61 aggaagacatggtgtcaccagcctataatgcaaagtactagaaactctgaaatagtagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aggaagacatggtgtcaccagcctataatgcaaagtactagaaactctgaaatagtagga 308
Query: 121 gaccatttgtgagctcttcttgggctcagtcagcatgtttgccaccatcaccaagggcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gaccatttgtgagctcttcttgggctcagtcagcatgtttgccaccatcaccaagggcct 248
Query: 181 ggactggataaggcttagtgtgtgcatatttgcacacacagagggggagagagagagaga 240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 247 ggactggataaggcttagtgtgtgcatatttgcacacagagagggggagagagagagaca 188
Query: 241 gacagacagacagactgagacagagagacagacagacacacaaacaaaaacatacagaca 300
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 187 gacagacagacagacagagacagagagacagacagacacacaaacaaaaacatacacaca 128
Query: 301 cacacatacaacctgggcattctgcatttaacaacacattagaattggaaaacacctgtt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 127 cacacatacaacctgggcattctgcatttaacaacacattagaattggaaaatatttgtt 68
Query: 361 atgatttcttttctttgctttgtttaaagcaaaatacaaaggctggagagatggttcag 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 67 atgatttcttttctttgctttgtttaaagcaaaatacaaaggctggagagatggctcag 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 956
Length adjustment: 10
Effective length of query: 546
Effective length of database: 946
Effective search space: 516516
Effective search space used: 516516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no399_k24.g1 MSMg01no399_k24.g1 CHROMAT_FILE:
MSMg01no399_k24.g1 PHD_FILE: MSMg01no399_k24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:12:46 2005
(344 letters)
>mm_chr14_110712320_110713065
Length = 746
Score = 607 bits (314), Expect = e-178
Identities = 338/346 (97%), Gaps = 2/346 (0%)
Strand = Plus / Plus
Query: 1 ccatattaaaattactttatgagaggaaaatataaa-a-aaaaattctttatgctttcat 58
|||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||
Sbjct: 201 ccatattaaaattactttatgagaggaaaatataaacataaaatttctttatgctttcat 260
Query: 59 tcacatgcaaactaatatcacaatgtcattttgatagcagtataagatattttattcaac 118
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 tcacatgcaaactaatatcacaatgtcattttgatagcagtgtaagatattttattcaac 320
Query: 119 tacaactgaggtataaaatgtatttgttcatccatatctcctgtttctagtaattattaa 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacaactgaggtataaaatgtatttgttcatccatatctcctgtttctagtaattattaa 380
Query: 179 taaaaatcttctcaaccctgctattaataagatgttaaatctatgttttttattccactg 238
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct: 381 taaaaatcttctcaaccctgctattaataagatgttaaatctatggtttttattctactg 440
Query: 239 aaaatatgatatatttctttggacattgattcttgctattagtcttcacataataaatat 298
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 441 aaaatatgatatatttctttggacattgattcctgctattattcttcacataataaatat 500
Query: 299 gaaaaacaaattattacttaaaattctctttataactagtggctga 344
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaaacaaattattacttaaaattctctttataactagtggctga 546
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 746
Length adjustment: 9
Effective length of query: 335
Effective length of database: 737
Effective search space: 246895
Effective search space used: 246895
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
