Query= MSMg01no400_a12.b1 MSMg01no400_a12.b1 CHROMAT_FILE:
MSMg01no400_a12.b1 PHD_FILE: MSMg01no400_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:11 2005
(512 letters)
>mm_chr14_10328890_10329800
Length = 911
Score = 920 bits (476), Expect = 0.0
Identities = 500/508 (98%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 5 gaattcccacagttttgcgcttcagagtcatggctgcagaaagggagtctttcaggtcct 64
||||||||||||| || |||||||||||| |||||||||| ||||||||||||||||||
Sbjct: 205 gaattcccacagtaatgtgcttcagagtcacggctgcagaa-gggagtctttcaggtcct 263
Query: 65 gggtaaagttcttgaatccattggtgggtctcccaggatagccttacaggttgaggctat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggtaaagttcttgaatccattggtgggtctcccaggatagccttacaggttgaggctat 323
Query: 125 ctgagctccaccaatgttcctatgcactcaacattcaaatggctcccttcacccttgaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgagctccaccaatgttcctatgcactcaacattcaaatggctcccttcacccttgaac 383
Query: 185 ttaggcttaatttgagtcaatttccatgtaagcatgagttagagatgtgtgttgtgggtt 244
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 ttaggcttaatttcagtcaatttccatgtaagcatgagttagagatatgtgttgtgggtt 443
Query: 245 tatctcatgcacgtggataagaatagccaatggtgaatgttttatcatggacatctcagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatctcatgcacgtggataagaatagccaatggtgaatgttttatcatggacatctcagt 503
Query: 305 tctactcagaatgatctattgtggcaatgataatatgtggcttatattcgagcaaagaca 364
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 504 tctactcagaatgatctattgtggccatgataatatgtggcttatattcgagcaaagaca 563
Query: 365 tctttgaatcacacagctgccatagtgctcaagatctgatcaatgtgtgcctcaaccaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctttgaatcacacagctgccatagtgctcaagatctgatcaatgtgtgcctcaaccaaa 623
Query: 425 ctatccatggttttatagaatctttctcagttcctgaaggaatgagacttcaattttcca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctatccatggttttatagaatctttctcagttcctgaaggaatgagacttcaattttcca 683
Query: 485 gcatcaatagatcctctcagtttgccat 512
||||||||||||||||||||||||||||
Sbjct: 684 gcatcaatagatcctctcagtttgccat 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 911
Length adjustment: 10
Effective length of query: 502
Effective length of database: 901
Effective search space: 452302
Effective search space used: 452302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_a12.g1 MSMg01no400_a12.g1 CHROMAT_FILE:
MSMg01no400_a12.g1 PHD_FILE: MSMg01no400_a12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:11 2005
(420 letters)
>mm_chr14_10442208_10443027
Length = 820
Score = 804 bits (416), Expect = 0.0
Identities = 419/420 (99%)
Strand = Plus / Minus
Query: 1 agggttttaaaagtcacattcataattttttcaaggtctatactccttctcctccatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agggttttaaaagtcacattcataattttttcaaggtctatactccttctcctccatgta 561
Query: 61 catgcacactccctgcccccaaaataaaaaagagtggagagggaagtcacagataaatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catgcacactccctgcccccaaaataaaaaagagtggagagggaagtcacagataaatgt 501
Query: 121 ctctgtgtcacaggctggcaatgcatcttccaccagacaaaatgagttactgggagaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctctgtgtcacaggctggcaatgcatcttccaccagacaaaatgagttactgggagaaaa 441
Query: 181 ttttcgatgtgatttagaagatacgatttaaattctattagaatttcttgagataaaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ttttcgatgtgatttagaagatacgatttaaattctattagaatttcttgagataaaagg 381
Query: 241 cagtgagttaattgagaggatgtaagccttcctgtgatatctgattgttaatgagcagaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cagtgagttaagtgagaggatgtaagccttcctgtgatatctgattgttaatgagcagaa 321
Query: 301 agtattaatcttagcaaccaagaagagaaaaatgcctagtgtttttcattaaatcaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agtattaatcttagcaaccaagaagagaaaaatgcctagtgtttttcattaaatcaacta 261
Query: 361 aatgattaaatgagttagtcactggaaaccattttaattttctgaatgtgaaatgtgcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aatgattaaatgagttagtcactggaaaccattttaattttctgaatgtgaaatgtgcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
