Query= MSMg01no400_e16.b1 MSMg01no400_e16.b1 CHROMAT_FILE:
MSMg01no400_e16.b1 PHD_FILE: MSMg01no400_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:33 2005
(242 letters)
>mm_chr14_113022077_113022718
Length = 642
Score = 325 bits (168), Expect = 2e-93
Identities = 206/238 (86%), Gaps = 31/238 (13%)
Strand = Plus / Plus
Query: 5 gaattcctcctccctgcttcttatcatctctttccaatgattatatatataatatataat 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 236 gaattcctcctccctggttcttatcatctctttccaatgattatatatata--------- 286
Query: 65 cattatatatatatatatatatatatatatatattatatatatatgcgtgcgtgtgtgtg 124
||||||||||||||||||||||| |||||||||||||||
Sbjct: 287 ---tatatatatatatatatatatat-------------------gcgtgcgtgtgtgtg 324
Query: 125 tattcaatatttatatataagctcactcctataaaggttaggcttaggtgacataactta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattcaatatttatatataagctcactcctataaaggttaggcttaggtgacataactta 384
Query: 185 ctaagacgtactgaatttttattctatgtaagtggtccactttctctatgctgtagtt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaagacgtactgaatttttattctatgtaagtggtccactttctctatgctgtagtt 442
Score = 60.7 bits (31), Expect = 8e-14
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 68 tatatatatatatatatatatatatatatat 98
|||||||||||||||||||||||||||||||
Sbjct: 308 tatatatatatatatatatatatatatatat 278
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 68 tatatatatatatatatatatatatatata 97
||||||||||||||||||||||||||||||
Sbjct: 306 tatatatatatatatatatatatatatata 277
Score = 58.7 bits (30), Expect = 3e-13
Identities = 30/30 (100%)
Strand = Plus / Minus
Query: 69 atatatatatatatatatatatatatatat 98
||||||||||||||||||||||||||||||
Sbjct: 309 atatatatatatatatatatatatatatat 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 4
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no400_e16.g1 MSMg01no400_e16.g1 CHROMAT_FILE:
MSMg01no400_e16.g1 PHD_FILE: MSMg01no400_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:33 2005
(416 letters)
>mm_chr14_113232752_113233567
Length = 816
Score = 650 bits (336), Expect = 0.0
Identities = 354/360 (98%)
Strand = Plus / Minus
Query: 57 ttcttatgattttatatagtttagaaattagccctctgttgggtataggactggtaaaga 116
|||||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 816 ttcttaagattttatatagtttagaaattagccctctgttggatataggactagtgaaga 757
Query: 117 cttttgacattctgtaggctgctgtattttctttcccatgatgttttcctgcttatagaa 176
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 756 cttttgacattctgtaggctgctgtattttctttctcatgatgttttcctgcttatagaa 697
Query: 177 gcttttcagttttatgaaatcccatttattaattgtttacctttgtggctgagctgctgg 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 gcttttcagttttatgaaatcccatttattaattgtttacctttgtggctgagctgctgg 637
Query: 237 tgattatttcagtaaatcttacaaacttttaataaggctaaaatatgcattagtcatgga 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgattatttcagtaaatcttacaaacttttaataaggctaaaatatgcattagtcatgga 577
Query: 297 gagaaattttggccacacaatctgtctgcaaggagttcactagtaggatacaaaggaata 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gagaaattttggccacacaatctgtctgcaaggagttcactagtaggatacaaaggaata 517
Query: 357 aagtaatagcaaatgagttttacattatatgtgattatgtcattcaatatacttaattga 416
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaataatagcaaatgagttttacattatatgtgattatgtcattcaatatacttaattga 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
