Query= MSMg01no400_f07.b1 MSMg01no400_f07.b1 CHROMAT_FILE:
MSMg01no400_f07.b1 PHD_FILE: MSMg01no400_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:36 2005
(561 letters)
>mm_chr14_36220131_36221090
Length = 960
Score = 1056 bits (546), Expect = 0.0
Identities = 555/558 (99%), Gaps = 1/558 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttatgaggattacataagctgacatttataaaatactggtgatcatgccaaac 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 ggaattcttatgaggattaaataagctgacatttataaaatactggtgatcatgccaaac 701
Query: 64 acatgataaacatggcagagttgctattctatagcccattcagagccaactccaacagtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 acatgataaacatggcagagttgctattctatagcccattcagagccaactccaacagtg 641
Query: 124 gctgagtatcggccatggatcaagctacttcccaagactgtcttccactttcactcatgg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 gctgagtatcggccatggatcaagctacttcccaagactgtcttccactttcactcatgg 581
Query: 184 acaccagtcaaggacctgagtgcttgtccttagaggtctctgcatgacagcatggtgata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 acaccagtcaaggacctgagtgcttgtccttagaggtctctgcatgacagcatggtgata 521
Query: 244 ggcctcaggcactctgctcactgtgggatttcctagcagcatactgggccctggatacgg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ggcctcaggcactctgctcactgtgggatttcctagcagcatactgggccctggatacgg 461
Query: 304 agcttaactgctcaagaaaaggcctgaatcccacctttaccgcctctctcacgtccacat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 agcttaactgctcaagaaaaggcctgaatcccacctttaccgcctctctcacgtccacat 401
Query: 364 tactggaacacatccagtcatgttcttttttctcaatgaacaaccaacctcctcctggaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 400 tactggaacacatccagtcatgttcttttttctcaatgaacaaccaacctcctccgggaa 341
Query: 424 aacctccccctgacttcctttcttaagaacttctcagaaacaaccctttctaaccagaac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aacctccccctgacttcctttcttaagaacttctcagaaacaaccctttctaaccagaac 281
Query: 484 gaagtgcccttctgggtgataaaaggagatttgcagggtgatagaaaaataacatttttt 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 280 gaagtgcccttctgggtgataaaaggagatttgcagggtgatagaaaaataaca-ttttt 222
Query: 544 ttttacccaatccataat 561
||||||||||||||||||
Sbjct: 221 ttttacccaatccataat 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 960
Length adjustment: 10
Effective length of query: 551
Effective length of database: 950
Effective search space: 523450
Effective search space used: 523450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_f07.g1 MSMg01no400_f07.g1 CHROMAT_FILE:
MSMg01no400_f07.g1 PHD_FILE: MSMg01no400_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:36 2005
(463 letters)
>mm_chr14_36001169_36002031
Length = 863
Score = 872 bits (451), Expect = 0.0
Identities = 460/463 (99%)
Strand = Plus / Plus
Query: 1 ttggtggacagtttttttgttgttatttgtttacttcttgtcatttcttttgtctctgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggtggacagtttttttgttgttatttgtttacttcttgtcatttcttttgtctctgtg 260
Query: 61 actgtttcttatgagaagatggaaatctttaccctgtctttgatgggtcatttttctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actgtttcttatgagaagatggaaatctttaccctgtctttgatgggtcatttttctctt 320
Query: 121 gtcattttcaaagccttgttccttttcttcctgactcatattatgtattatgttggtaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcattttcaaagccttgttccttttcttcctgactcatattatgtattatgttggtaag 380
Query: 181 ttagtggtcctacaggtgtctgagactttgcccccttccttctctgtgtgtgtcattatt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 ttagtggtcctacaggtgtctgagactttgctcccttccttctctgtgtgtgtcattatt 440
Query: 241 tctcctttctccttcctctaccactaattgattttagggtcttttttttatatatagaat 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcctttctccttccactaccactaattgattttagggtcttttttttatatatagaat 500
Query: 301 tttgctatattctagcctccaattcctgatgctcctgcctcagatttcaaatgctggaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 501 tttgctatattctagcctccaattcctgatgctcctgcctcagatttcaaatgctgggat 560
Query: 361 tatatgtgactgctacgtctatacccttcttacacaggttagataatctcaagtgatcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatatgtgactgctacgtctatacccttcttacacaggttagataatctcaagtgatcta 620
Query: 421 agttcaggttcttaccaattaatttttaaatttgtatatactg 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttcaggttcttaccaattaatttttaaatttgtatatactg 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
