Query= MSMg01no400_h20.b1 MSMg01no400_h20.b1 CHROMAT_FILE:
MSMg01no400_h20.b1 PHD_FILE: MSMg01no400_h20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:49 2005
(251 letters)
>mm_chr14_64713674_64714324
Length = 651
Score = 462 bits (239), Expect = e-135
Identities = 248/251 (98%)
Strand = Plus / Plus
Query: 1 cagatgcttgggaaacacctgtgtggaggctccatcatccaccggtggtggcttctgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 cagatgcttgggaaacacctgtgtggaggctccatcatccaccggtggtgggttctgaca 260
Query: 61 gcagcacactgcttcccgagaaccctgtaagtgtctgtggcattgccttcatttacatcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagcacactgcttcccgagaaccctgtaagtgtctgtggcattgccttcatttacatcg 320
Query: 121 aatagagtacacatgcagtctggggtagtcacttggtctatgaagctttttcaagccctg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aatagagtacacatgcagtctgggatagtcacttggtctatgaagctttttcaagccctg 380
Query: 181 ggctctgctcctggtggctttggactgaagtctgtccctatccagtcacccctcttgact 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctctgctcctggtggctttggagtgaagtctgtccctatccagtcacccctcttgact 440
Query: 241 tagtcaactct 251
|||||||||||
Sbjct: 441 tagtcaactct 451
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no400_h20.g1 MSMg01no400_h20.g1 CHROMAT_FILE:
MSMg01no400_h20.g1 PHD_FILE: MSMg01no400_h20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:49 2005
(428 letters)
>mm_chr14_64901104_64901932
Length = 829
Score = 673 bits (348), Expect = 0.0
Identities = 360/364 (98%), Gaps = 1/364 (0%)
Strand = Plus / Minus
Query: 66 ctagaaggtcttgcttaggaaggcttttggagacctgtggtctaagtaatatttaaaaat 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 ctagaaggtcttgcttaggaaggcttttggagacctgtggtctaagtaatatttaaaaat 770
Query: 126 atagctgggcctggtagtacagccctgtacttccacctgttaaggaggctaaggcaggag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 atagctgggcctggtagtacagccctgtacttccacctgttaaggaggctaaggcaggag 710
Query: 186 aattacaaattcagggtctgcctataaagtgaattcaaggccagcttaggcaactcagca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 aattacaaattcagggtctgcctataaagtgaattcaaggccagcttaggcaactcagca 650
Query: 246 agatcatgtctaaaaataaaggaaaaaaagaaagttgaggatacatctcggtggcttgcc 305
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 649 agatcatgtctaaaaataaaggaaaaaaagaaagttgaggatacatctcagtggcttgcc 590
Query: 306 tggtgggtgcaaggtcttcggttcaaatcccagtactacacag-aaaaaaatgatgttct 364
||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct: 589 tggtgggtgcaaggtcttcggttcaaatcccagtactacacagaaaaaaaatgttgttct 530
Query: 365 aaatatgtaaatagttatatcaagataaaagcttgagggccaggcatgcctgtaatgcag 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 aaatatgtaaatagttttatcaagataaaagcttgagggccaggcatgcctgtaatgcag 470
Query: 425 gacg 428
||||
Sbjct: 469 gacg 466
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
