NTTCTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCCGGTCTCCCGTAGGNAAAGACAGGTGGTACTGGGAGGTA
TAAAAATGGTAGCTAAATATGAGTCATGAAAATAGTCCAGTTGGCAGCGT
TCCTTCATAATCACACAATCATGATGGTTTCTACCTCTGCTCCTGATTGA
ATGCTTGCCCTGACTTTCCTCACCGATGAACCTTGATGTGTAAGTTAAAT
ATAAGCTTTCCTCCCCAGGGCTGGCTTACTCCTGGTTTTTTTCATAGTAA
CAGAGAATAGACCTAGGACATCTTTATTTTTTGTTATGTTAATAATAATA
TATAGCACAGTCATCTGAAACATCTCTCCTGGCCATGTGATGGGCACTTT
AAAAAACTATTGATTTGTTGAACTTGGTGGCACACACCTTTTAATCCCAG
CACTGGGAAGGCAGAGGCAAGCGGATTTCTGAGTTCGAGGCCAGCCTGGT
CTACAAAGTGAGTTCCAGGACAGTCAGAGCTATACCGAGAAATCCTGTAT
TGAAAAACCAAAATCAAAACTGAAACCAAACCAAACAAGCAAACAAACAA
AGATTTGTTGAGATTATAATATAATAGTGTCATTTCCTTCTTTCCTCTCC
TCTGTCCAAGCACTCCCACATAGCCCTTTATTTTCTCTTTCAAGTTCATG
GCCTGAAATTTTTTTTTATTATTATTATAAGCAGAATAAAAA

NNCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTACACTATTTAATAGGGC
ATCATTTTCCCAGCGTTACATAAAGTAGAATGACTTTACATGGACAAAAC
CTTATAGTGGATTATAACCATTAATATATTTTTCATAAAAAATTATAGGT
ACAGGCCAGCAAGGTAGCTTAGAAGATAAATGACCAAAGATTTGATCTCA
GAGTCCACATGGGAGAAGATGACAGACTGCTGCTCATCATGGTGGTGGTA
GTGTGAGCTTACAAATAGGTAAGTGAAATAGTACATACTTACATAAGTAA
GTAAGTCAGTCAGTAAATTAATAAATAAATATGTAAATAAACTAAAAGAG
GCAGAAAATTGTAGGTAGATACTTAGAACACAGAACTAATAAAAGAAGAA
CAAATGAATGGATACAGAAAATGTGGTACATTTATACAATGGAGTCCTAC
TCAGCGATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATAGA
CCTGGAGGGCATCATCCTGAGTGAGGTAACACAATCACAAAATAACTCAC
ATGATATGTACTCACTGATAAGTGGATATTAGCCCAGAAACTTAGAATAC
CCAAGATACAAGATACAATTTGCAAAACACATGAAACTCAAGCAGAACAA
AGACCAAAGTGTGGACACTTTGCCCCTTTTTAGAATTGGGAAN

Query= MSMg01no401_b16.g1 MSMg01no401_b16.g1 CHROMAT_FILE:
MSMg01no401_b16.g1 PHD_FILE: MSMg01no401_b16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:39 2005
         (552 letters)



>mm_chr14_97187737_97188688
          Length = 952

 Score = 1067 bits (552), Expect = 0.0
 Identities = 552/552 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctacactatttaatagggcatcattttcccagcgttacataaagtagaatgactttacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctacactatttaatagggcatcattttcccagcgttacataaagtagaatgactttacat 260

                                                                       
Query: 61  ggacaaaaccttatagtggattataaccattaatatatttttcataaaaaattataggta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacaaaaccttatagtggattataaccattaatatatttttcataaaaaattataggta 320

                                                                       
Query: 121 caggccagcaaggtagcttagaagataaatgaccaaagatttgatctcagagtccacatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggccagcaaggtagcttagaagataaatgaccaaagatttgatctcagagtccacatg 380

                                                                       
Query: 181 ggagaagatgacagactgctgctcatcatggtggtggtagtgtgagcttacaaataggta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggagaagatgacagactgctgctcatcatggtggtggtagtgtgagcttacaaataggta 440

                                                                       
Query: 241 agtgaaatagtacatacttacataagtaagtaagtcagtcagtaaattaataaataaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtgaaatagtacatacttacataagtaagtaagtcagtcagtaaattaataaataaata 500

                                                                       
Query: 301 tgtaaataaactaaaagaggcagaaaattgtaggtagatacttagaacacagaactaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtaaataaactaaaagaggcagaaaattgtaggtagatacttagaacacagaactaata 560

                                                                       
Query: 361 aaagaagaacaaatgaatggatacagaaaatgtggtacatttatacaatggagtcctact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagaagaacaaatgaatggatacagaaaatgtggtacatttatacaatggagtcctact 620

                                                                       
Query: 421 cagcgattaaaaagaatgaatttatgaaattcctaggcaaatggatagacctggagggca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagcgattaaaaagaatgaatttatgaaattcctaggcaaatggatagacctggagggca 680

                                                                       
Query: 481 tcatcctgagtgaggtaacacaatcacaaaataactcacatgatatgtactcactgataa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcatcctgagtgaggtaacacaatcacaaaataactcacatgatatgtactcactgataa 740

                       
Query: 541 gtggatattagc 552
           ||||||||||||
Sbjct: 741 gtggatattagc 752


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)