Query= MSMg01no402_b12.b1 MSMg01no402_b12.b1 CHROMAT_FILE:
MSMg01no402_b12.b1 PHD_FILE: MSMg01no402_b12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:53 2005
(439 letters)
>mm_chr14_76682970_76683808
Length = 839
Score = 764 bits (395), Expect = 0.0
Identities = 413/419 (98%), Gaps = 1/419 (0%)
Strand = Plus / Minus
Query: 21 gtggaacagtacaggctgtggtggacagagcagcccctcttctcccatcacaccttttaa 80
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 839 gtggaacagtacaggctgtggt-gacagagcagcccctcttctcccatcacaccttttaa 781
Query: 81 tggaacccttggtcaccatcatcactaggtcaatttcctccgtttattatgacaatacca 140
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 780 tggaacccttggtcaccatcatcactaggtcaatttcctctgtttattatgacaatacca 721
Query: 141 cagactgggtaattataaacaataatgaattgggctcgaggctctgaaggctgggacagc 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 cagactgggtaattataaacaataatgaattgggctcgaggctctgaaggctgggacagc 661
Query: 201 cactgtcaaggcattggcattggagagaccctttcatttgcatggtggaaggcattatgt 260
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cgctgtcaaggcattggcatcggagagaccctttcatttgcatggtggaaggcattatgt 601
Query: 261 gggtcgagcacaccagagacaggatgggaagcgggggtggcaaactctcccacataccta 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gggtcgagcacaccagagacaggatgggaagcgggggtggcaaactctcccacataccta 541
Query: 321 gcagccttaactcatgaagtcagtgtccctaaaacccaatgactgctttatggtcccact 380
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gcagccttaactcatgaaggcagtgtccctaaaacccaatgactgctttatggtcccact 481
Query: 381 tctcaacactttgcttaggggattacattcgcaacacgaggttgagggacactcagatc 439
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 480 tctcaacactttgcttaggggattacattcgcaacacgaggttgagggacattcagatc 422
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_b12.g1 MSMg01no402_b12.g1 CHROMAT_FILE:
MSMg01no402_b12.g1 PHD_FILE: MSMg01no402_b12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:53 2005
(182 letters)
>mm_chr14_76577339_76577920
Length = 582
Score = 344 bits (178), Expect = 2e-99
Identities = 181/182 (99%)
Strand = Plus / Plus
Query: 1 tgatcatagcttccagatagttctcccagggccactaccgaatgagagcaactccatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgatcatagcttccagatagttctcccagggccactaccgaatgagagcaactccatgga 260
Query: 61 aaaactaagggctagacggatcctttccggcctcagcggcacagagacagctttcctctg 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 aaaactaagggctagacggatcctttccggcctcagccgcacagagacagctttcctctg 320
Query: 121 gcttaaatggactttctttgtaaaacgggagagtctgagttttgggttttaagctgattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttaaatggactttctttgtaaaacgggagagtctgagttttgggttttaagctgattt 380
Query: 181 gc 182
||
Sbjct: 381 gc 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
