Query= MSMg01no402_p09.b1 MSMg01no402_p09.b1 CHROMAT_FILE:
MSMg01no402_p09.b1 PHD_FILE: MSMg01no402_p09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:03 2005
(329 letters)
>mm_chr14_41478459_41479189
Length = 731
Score = 617 bits (319), Expect = 0.0
Identities = 328/331 (99%), Gaps = 2/331 (0%)
Strand = Plus / Minus
Query: 1 tattaaacaaagctctgtaataaaactattctatttttgcatttacaagtgaataataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tattaaacaaagctctgtaataaaactattctatttttgcatttacaagtgaataataac 472
Query: 61 aaattaaaagttaatgcaggtgtatttccttcataaatgatcatatccctagagaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 aaattaaaagttaatgcaggtgtatttccttcataaatgatcatatccctagagaaataa 412
Query: 121 aaaaatgaaaccattatctcaattggaaatcaatcactgtttgaaaaaaaaacctccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aaaaatgaaaccattatctcaattggaaatcaatcactgtttgaaaaaaaaacctccaca 352
Query: 181 ccaagggtaatgcaatagtaacagctattttttttaaatgggcttaaaattata-tttaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 351 ccaagggtaatgcaatagtaacagctattttttttaaatgggcttaaaattatattttaa 292
Query: 240 gtgattttatattcatcctgaaagtatggattaaaagctttaaaatgtgctttc-tcttt 298
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 291 gtgattttatattcatcctgaaagtatggattaaaagctttaaaatgtgctttctttttt 232
Query: 299 tcttaacaattccatttttgaaaactaagat 329
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Sbjct: 231 tcttaacaattccatttttgaaaactaagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 731
Length adjustment: 9
Effective length of query: 320
Effective length of database: 722
Effective search space: 231040
Effective search space used: 231040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no402_p09.g1 MSMg01no402_p09.g1 CHROMAT_FILE:
MSMg01no402_p09.g1 PHD_FILE: MSMg01no402_p09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:04 2005
(418 letters)
>mm_chr14_41286564_41287382
Length = 819
Score = 795 bits (411), Expect = 0.0
Identities = 417/419 (99%), Gaps = 1/419 (0%)
Strand = Plus / Plus
Query: 1 catacaagttttgaattagaaaaa-atccactgatactccaatgcttagagcattgagcc 59
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 catacaagttttgaattagaaaaatatccactgatactccaatgcttagagcattgagcc 260
Query: 60 acagcacgttctgggaagtgctgctattgcaacactaacttcttatgttcatgaacatga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagcacgttctgggaagtgctgctattgcaacactaacttcttatgttcatgaacatga 320
Query: 120 ggtattttcccatctgtttgtttatcttcaattgtttatactgttatcttataggattcg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtattttcccatctgtttgtttatcttcaattgtttatactgttatcttataggattcg 380
Query: 180 catgcatgttttatatttctctcatctttgactcatatatttaatttttaaatgtttatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgcatgttttatatttctctcatctttgactcatatatttaatttttaaatgtttatc 440
Query: 240 ttagctatttttctctttttatgatcaaatatctgatagaagcaaactaatggagaagag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagctatttttctctttttatgatcaaatatctgatagaagcaaactaatggagaagag 500
Query: 300 atttaacttagcttgcagtttaaggaatacagtccatcttaaaagggaagacacatcagc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atttaacttagcttgcagtttaaggaatacagtccatcttaaaagggaagacacatcagc 560
Query: 360 gtctatggtggtgagagctctggcagactattatagatccattttcacaacctggcata 418
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctatggtggtgagagctctggtagactattatagatccattttcacaacctggcata 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 819
Length adjustment: 9
Effective length of query: 409
Effective length of database: 810
Effective search space: 331290
Effective search space used: 331290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
