Query= MSMg01no403_b18.b1 MSMg01no403_b18.b1 CHROMAT_FILE:
MSMg01no403_b18.b1 PHD_FILE: MSMg01no403_b18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:16 2005
(545 letters)
>mm_chr14_10426960_10427904
Length = 945
Score = 934 bits (483), Expect = 0.0
Identities = 521/539 (96%), Gaps = 9/539 (1%)
Strand = Plus / Plus
Query: 5 gaattcaccaatggaggtatatcaagttgccaatggactgtgtggcagatgaggggcata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattcaccaatggaggtatatcaagttgccaatggactgtgtggcagatgaggggcata 273
Query: 65 gatctcatttctcccacccagcccaggaggagctaacatcgctgacaacttgacctcaga 124
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct: 274 gatctcatttttcccacccagcccaggaggagctaacatcgctgacatcttgaccacaga 333
Query: 125 cttctagcttctagagctgggaggcaatacatttattttgtgtcttagctagtgccaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 334 cttctagcttctagagctgggaggcaatacatttattttgtgtcttagccagtgccaatg 393
Query: 185 tatggttagttatagcaacagtgtcttactcttctccccatttcatagcagccagggcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tatggttagttatagcaacagtgtcttactcttctccccatttcatagcagccagggcac 453
Query: 245 agaaaagccagaggatgtgtccaaggtcacaaggctatcatgtggcaggaccagagtcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 agaaaagccagaggatgtgtccaaggtcacaaggctatcatgtggcaggaccagagtcca 513
Query: 305 cagttaggcctgacactggagctcatacctatagtcactgccacagttcttgttgacaca 364
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 514 cagttaggactgacactggagctcatgcctatagtcactgccacagttcttgttgataca 573
Query: 365 ggatcctgagaaaatcctatctcacatatctaagaagtggataaaatagcatgttccttc 424
|||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 574 ggatcctgagaaaatcctatctca---------gaagtggataaaatagtatgttccttc 624
Query: 425 taatgtcccacagtttaaggaaaatggaagtggttcctcttttcatgtgtgcatccagag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taatgtcccacagtttaaggaaaatggaagtggttcctcttttcatgtgtgcatccagag 684
Query: 485 ccattgatttcaaacaagagtgactgctgggaacacctgcctcctacatcttaagggaa 543
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 685 ccattgatttcaaacaagagtgactgctgggaacacctgcttcctacatcttaagggaa 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space: 500225
Effective search space used: 500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_b18.g1 MSMg01no403_b18.g1 CHROMAT_FILE:
MSMg01no403_b18.g1 PHD_FILE: MSMg01no403_b18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:16 2005
(314 letters)
>mm_chr14_10665782_10666496
Length = 715
Score = 528 bits (273), Expect = e-154
Identities = 294/301 (97%), Gaps = 1/301 (0%)
Strand = Plus / Minus
Query: 15 aatatcatctatggtgttcaactttcttaatgctaagactcttaaatatatttcctcatg 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aatatcatctatggtgttcaactttcttaatgctaagactcttaaatatatttcctcatg 656
Query: 75 ttgtagtgacctccaaccataaaattgttttctttgctacttcataagtataattttgct 134
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ttgtagtgacctccagccataaaattgttttctttgctacttcataagtataattttgct 596
Query: 135 actgtgatggatcataatgtaaatatttttagaaatagaagtttgtcaaaggggccatgg 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 actgtgatggatcataatgtaaatatttttagaaatagaagtttgtcaaaggggccatgg 536
Query: 195 cccacaaattgagaactactctctctgagaaaactcattcttattttatagtaattaagg 254
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 535 cccacaaattgagaactactctctctgagaaaactcattcttattttaaaggaattaagg 476
Query: 255 actctgagtttgaggatgaaac-ttttttttcatctcgcgcatgcgtatttgattatttg 313
|||||||||||||||||||||| ||||||||||||||| | ||| |||||||||||||||
Sbjct: 475 actctgagtttgaggatgaaactttttttttcatctcgtgtatgggtatttgattatttg 416
Query: 314 g 314
|
Sbjct: 415 g 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|