XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
CATATAATAAAGAGCATTTCTTGGACTTTATGATAATGGGGATTAGGTTG
TGCTAAAGAATCATAACAGAGATCAGGCAAGAATTCCCAACATGAAAACA
ATTAGATAACGTTAGATAAATGAAACTATTACTCAGACTACTGATCATTA
AGAAACATATTTTAAGCTGGGCAGTGGTGGCACACTCCTTTAATCTCAGC
ACTTGGGAGGCAGAGGCAGGCTGCTCTTTGAGTTCAAGGCCAGCCTGGTC
TACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTC
GAGAAAACCAAAAACCAAAAACAAACCAAAAACCAAAAACAACCAAAAAC
CAAAAACTAAAAACAACCAAAAACAAAACAAAACAAAAAAAAAAACCAAA
AAAAGAAAAATATTTAAACTTAGAATAAAAAATATCATGAAATGTAAGCT
GTAATATCTTAATAATGATGATAATAATATAAGTATATAGTAAAAACTAC
AAAACAGCACTGTTAGAAACTGTATAGTTTACTAGGAAAATGAAGTTTGT
GTAATTTTATATGATAAACATGATGCAATCATAATAAAATAAATAGGCGC
AATTGCTACTGCCAAAGAAAAATAAAAGCCACCACCAGCATATTATAATA
AATAAATGGAGGTTATTTTGGGGATTGCTGAAATAATGATGTGACTAAAA
AGCTGGTGCTATA

TATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXACGCAGTTGAATCCTTCTCAACAGTCTGTTTT
ACGGGAACACTTCATTACCACCGTTCCCCAGCTGAAGAGTTCTGAATTCA
CGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACACTTCATTACC
ATGACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCCTGTGA
TGGTAACCGTCCCAGGTTTTCTCATCCCGGGTCTTCTCGTCCCAGGTCTT
CTCGTCCCGTCCTTTTGTTTTCTCGTCCCGGTTTCTTTCTTCCCGGGTTT
CGGCACCAACTCTTACCCGCGTTCACGCGACCGGCCAGGAAGACGCAACA
AACCGGAATCTTCTGCGGCAAAAGCTTTATTGCTTACATCTTCAGGAGCA
AGAGTGCAAGAGCAAAAGCAAGCAAGAGAGCAAAAGAGCAAGAGCAAGAA
AGCAAGAGCAAGAGAGAGAAAAAGAACTAGAGCCAGAAAGCAAGAGCAAG
ATAAAGAACAAGAGCAAGAAAAAGAACTAGAACAAGAAAGCCAGAGAGAG
AACTTGATCTAGAAAGCCAGAGAGAGAAAGCAAGATACGCTGAGCCAGAT
ATAGTAATTGATCCAGAAAGCCAGATAAAGATCTTGACCCCGATTCCTTG
AGAGAGTAACATAACTTTATCCAGAGAGTTTGAGCCCTAGCCAGAGATAA
TAAGATAGCTCCA

Query= MSMg01no403_h17.b1 MSMg01no403_h17.b1 CHROMAT_FILE:
MSMg01no403_h17.b1 PHD_FILE: MSMg01no403_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:47 2005
         (534 letters)



>mm_chr14_112909645_112910579
          Length = 935

 Score =  915 bits (473), Expect = 0.0
 Identities = 531/575 (92%), Gaps = 41/575 (7%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagagcatttcttggactttatgataatggggattaggttgtgctaaagaatcataacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 aagagcatttcttggactttatgataatggggattaggttgtgctaaagaatcataacag 220

                                                                       
Query: 61  agatcaggcaagaattcccaacatgaaaacaattagataacgttagataaatgaaactat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 agatcaggcaagaattcccaacatgaaaacaattagataacgttagataaatgaaactat 280

                                                                       
Query: 121 tactcagactactgatcattaagaaacatattttaagctgggcagtggtggcacactcct 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 281 tactcagactactgatcattaagaaacatattttaagccgggcagtggtggcacactcct 340

                                                                       
Query: 181 ttaatctcagcacttgggaggcagaggcaggctgctctttgagttcaaggccagcctggt 240
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 341 ttaatctcagcacttgggaggcagaggcaggcggctctttgagttcaaggccagcctggt 400

                                                                       
Query: 241 ctacaaagtgagttccaggacagccagggctatacagagaaaccctgtctcgagaaaacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctacaaagtgagttccaggacagccagggctatacagagaaaccctgtctcgagaaaacc 460

                                                                       
Query: 301 aaaaaccaaaaacaaaccaaaaaccaaaaac----------------------------- 331
           |||||||||||||||||||||||||||||||                             
Sbjct: 461 aaaaaccaaaaacaaaccaaaaaccaaaaaccaaaaacaaccaaaaaccaaaaaccaaaa 520

                                                                       
Query: 332 ------aaccaaaaaccaaaaactaaaaacaaccaaaaacaaaacaaaacaaaaaaaaaa 385
                 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 521 accaaaaaccaaaaaccaaaaactaaaaacaaccaaaaacaaaacaaaaaaaaaaaaaaa 580

                                                                       
Query: 386 a----ccaaaaaaa-gaaaaatatttaaacttagaataaaaaa-tatcatgaaatgtaag 439
           |    ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 581 aaaaaccaaaaaaaagaaaaatatttaaacttagaataaaaaaatatcatgaaatgtaag 640

                                                                       
Query: 440 ctgtaatatcttaataatgatgataataatataagtatatagtaaaaactacaaaacagc 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ctgtaatatcttaataatgatgataataatataagtatatagtaaaaactacaaaacagc 700

                                              
Query: 500 actgttagaaactgtatagtttactaggaaaatga 534
           |||||||||||||||||||||||||||||||||||
Sbjct: 701 actgttagaaactgtatagtttactaggaaaatga 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 534
Length of database: 935
Length adjustment: 10
Effective length of query: 524
Effective length of database: 925
Effective search space:   484700
Effective search space used:   484700
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)