Query= MSMg01no403_n10.b1 MSMg01no403_n10.b1 CHROMAT_FILE:
MSMg01no403_n10.b1 PHD_FILE: MSMg01no403_n10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:16 2005
(241 letters)
>mm_chr14_78017273_78017913
Length = 641
Score = 435 bits (225), Expect = e-126
Identities = 237/241 (98%)
Strand = Plus / Plus
Query: 1 caaccttgctaatgatggcttggagcaaaggaggagggacagagaccccattgcctggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaccttgctaatgatggcttggagcaaaggaggagggacagagaccccattgcctggag 260
Query: 61 gaaactccttttcccatcgctcatctttaggcacaaatgtgtggtgcctgtcacccacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaactccttttcccatcgctcatctttaggcacaaatgtgtggtgcctgtcacccacat 320
Query: 121 gggagttgtttccccaaaatggagtgcgctgatgcactcgacgggaactgccaagtattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 gggagttgtttccccaaaatggagtgcgctgatgcactcgacgggaactgccaagcacag 380
Query: 181 acatgaaaaggagagtctctctcctctaccagctccattgcttacccagctcctctaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acatgaaaaggagagtctctctcctctaccagctccattgcttacccagctcctctaagc 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no403_n10.g1 MSMg01no403_n10.g1 CHROMAT_FILE:
MSMg01no403_n10.g1 PHD_FILE: MSMg01no403_n10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:16 2005
(238 letters)
>mm_chr14_78226467_78227108
Length = 642
Score = 437 bits (226), Expect = e-127
Identities = 237/242 (97%), Gaps = 4/242 (1%)
Strand = Plus / Minus
Query: 1 ttgcaaagaactctaaaaacgaactgatttaattttatttgaggacattgtaaatctaag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttgcaaagaactctaaaaatgaactgatttaattttatttgaggacattgtaaatctaag 383
Query: 61 attccattataaatgttgtaatagaatcatttcagagaacagggagaatttcttttagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attccattataaatgttgtaatagaatcatttcagagaacagggagaatttcttttagca 323
Query: 121 ttatttttattatcactgttattattgttagttcatttatcataccactacatattatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttatttttattatcactgttattattgttagttcatttatcataccactacatattatac 263
Query: 181 atttgccttttatgaatgcatttattttttg-aatt---ataagacatgaaaagattccc 236
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 262 atttgccttttatgaatgcatttattttttgaaattatgataagacatgaaaagattccc 203
Query: 237 tt 238
||
Sbjct: 202 tt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 642
Length adjustment: 9
Effective length of query: 229
Effective length of database: 633
Effective search space: 144957
Effective search space used: 144957
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
