Query= MSMg01no404_i20.b1 MSMg01no404_i20.b1 CHROMAT_FILE:
MSMg01no404_i20.b1 PHD_FILE: MSMg01no404_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:16 2005
(359 letters)
>mm_chr14_121235993_121236751
Length = 759
Score = 578 bits (299), Expect = e-169
Identities = 336/353 (95%), Gaps = 13/353 (3%)
Strand = Plus / Minus
Query: 7 ggaattctttagctgttc--gagcccttgaaaattatatgtcaactcact-tcccccctc 63
||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||
Sbjct: 514 ggaattctttagctg--caagagcccttgaaaattatatgtcaactcactcccccccctc 457
Query: 64 ccgcccccacatccaccccataggttttgcagaaaggagcgaattttggctcagatgatt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ccgcccccacatccaccccataggttttgcagaaaggagcgaattttggctcagatgatt 397
Query: 124 agctgaagatctcagagagcagaactgggaagtcgctcgctagcacggcttgtcctgata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agctgaagatctcagagagcagaactgggaagtcgctcgctagcacggcttgtcctgata 337
Query: 184 gatttttatggcagaattggctagactttcgcttagctcatcatgggacagtatgaatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gatttttatggcagaattggctagactttcgcttagctcatcatgggacagtatgaatga 277
Query: 244 atcttttaaaagatttttattttaaagaagatttttttttagttaatacatatgtaagca 303
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 276 atcttttaaaagatttttattttaaagaagatttattttaa-ttaatacatatgtaagca 218
Query: 304 cacgtccctcggtgtgtgtggtatgtatatgtgtgtgtgtgtatggagggatg 356
|||||||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct: 217 cacgtccctcggtgtgtgcggtatgt----gtgtg---gtgtatggagggatg 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no404_i20.g1 MSMg01no404_i20.g1 CHROMAT_FILE:
MSMg01no404_i20.g1 PHD_FILE: MSMg01no404_i20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:19:16 2005
(223 letters)
>mm_chr14_121055830_121056452
Length = 623
Score = 431 bits (223), Expect = e-125
Identities = 223/223 (100%)
Strand = Plus / Plus
Query: 1 tgtctacaattcgatgaactatcgttaagtgaactatcattaagggggtattcgtagttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtctacaattcgatgaactatcgttaagtgaactatcattaagggggtattcgtagttg 260
Query: 61 ctgagacagtctcttcatcaggagcaaagtctgtttaggctccagtgtaaagacaacacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgagacagtctcttcatcaggagcaaagtctgtttaggctccagtgtaaagacaacacc 320
Query: 121 tcccttgggcagtgctcatgcagttttctgcccatcctagaatatctggatccccaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccttgggcagtgctcatgcagttttctgcccatcctagaatatctggatccccaagct 380
Query: 181 cagacttcctgtcctttctatagtctcagagtgtaaaagtgct 223
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagacttcctgtcctttctatagtctcagagtgtaaaagtgct 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
