Query= MSMg01no405_n01.b1 MSMg01no405_n01.b1 CHROMAT_FILE:
MSMg01no405_n01.b1 PHD_FILE: MSMg01no405_n01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:55 2005
(420 letters)
>mm_chr14_61607480_61608297
Length = 818
Score = 700 bits (362), Expect = 0.0
Identities = 402/416 (96%), Gaps = 2/416 (0%)
Strand = Plus / Minus
Query: 5 gaattcagtgctttcacagattcatcggaccatctagttgggacttaaagtcagtcaacc 64
||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 618 gaattcagtgcagtcacagattcaccgggccatctagttgggacttaaagtcagtcaacc 559
Query: 65 tttcatcaagagagtgtttgttctcagggtgtggttgttatatgctggagaccattcgca 124
||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tttcatc--cagagtgtttattctcagggtgtggttgttatatgctggagaccattcgca 501
Query: 125 ttctagttgggaccaggttaggtggccattaaacttggtgtacaactatttataagtcgg 184
| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||
Sbjct: 500 tcctagttgggaccaggttaggtggccgttaaacttggtgtccaactatttataagtcgg 441
Query: 185 ctccctgaggagggggcttagcctaagaaattttgttttcattcttgaatgaagaaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctccctgaggagggggcttagcctaagaaattttgttttcattcttgaatgaagaaaata 381
Query: 245 ccacgacagtgtagcatagcaagtccctcttgaattcaagaagccagatccttactggta 304
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 ccaggacagtgtagcatagcaagtccctcttgaattcaaggggccagatccttactggta 321
Query: 305 tttctcagcctgctcttcagctcctactcatgcggaagaagaaagggctttcagtgggga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttctcagcctgctcttcagctcctactcatgcggaagaagaaagggctttcagtgggga 261
Query: 365 tctacctgacagcatagagctgccaagctccaaactgcgtctcaagtgaactccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctacctgacagcatagagctgccaagctccaaactgcgtctcaagtgaactccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 818
Length adjustment: 9
Effective length of query: 411
Effective length of database: 809
Effective search space: 332499
Effective search space used: 332499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_n01.g1 MSMg01no405_n01.g1 CHROMAT_FILE:
MSMg01no405_n01.g1 PHD_FILE: MSMg01no405_n01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:55 2005
(454 letters)
>mm_chr14_61466072_61466926
Length = 855
Score = 864 bits (447), Expect = 0.0
Identities = 453/455 (99%), Gaps = 1/455 (0%)
Strand = Plus / Plus
Query: 1 caaactatgggaagacaaagtcagtgccaagttaaaggactgggcatcagatgatgttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaactatgggaagacaaagtcagtgccaagttaaaggactgggcatcagatgatgttca 260
Query: 61 aagactaagttaatcattaaattgtaactagcccccaggtcactgtctcttcactagtaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 aagactaagttaatcattaaattgtaactagcccccaggtcactgtcgcttcactagtaa 320
Query: 121 atatgttcagaaataatttatatgccatttgaaggactatttgaccttgacagtgctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgttcagaaataatttatatgccatttgaaggactatttgaccttgacagtgctcca 380
Query: 181 agtcattagattcttattgtcttagaagcttaatgttctaaatatatagaatcatggccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcattagattcttattgtcttagaagcttaatgttctaaatatatagaatcatggccc 440
Query: 241 caattgcctattttt-gatcttctatcatttactattctaacctgtgatctgttgaactc 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caattgcctattttttgatcttctatcatttactattctaacctgtgatctgttgaactc 500
Query: 300 ttcagtatacatactagggaacgttgatagggatgaaaacaacctcttaactatggaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcagtatacatactagggaacgttgatagggatgaaaacaacctcttaactatggaaga 560
Query: 360 cagaatagtaacagtttcctaggtttcaataacttacctaatttgtaaactttgtggggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaatagtaacagtttcctaggtttcaataacttacctaatttgtaaactttgtggggc 620
Query: 420 ttcagtgaggtgttttttgttttgttttgggtttt 454
|||||||||||||||||||||||||||||||||||
Sbjct: 621 ttcagtgaggtgttttttgttttgttttgggtttt 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 855
Length adjustment: 10
Effective length of query: 444
Effective length of database: 845
Effective search space: 375180
Effective search space used: 375180
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
