Query= MSMg01no406_e18.b1 MSMg01no406_e18.b1 CHROMAT_FILE:
MSMg01no406_e18.b1 PHD_FILE: MSMg01no406_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:33 2005
(517 letters)
>mm_chr14_73553184_73554102
Length = 919
Score = 922 bits (477), Expect = 0.0
Identities = 510/523 (97%), Gaps = 7/523 (1%)
Strand = Plus / Plus
Query: 1 ttcaaattttctgaatgcattagtctccacttccagttgagaaaaaa-ttacaaatttca 59
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 198 ttcaaattttctgaatgcattagtctccacttccagttgagaaaaaaattacaaatttca 257
Query: 60 tcaagaacata--aaacactgataaggggcatggtgacatttgacccccgtttgattatt 117
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 tcaagaacatataaaacactgataaggggcatggtgacatttgacccccgtttgattatt 317
Query: 118 tttaatctatcttttttgacttttagtgacggaagcaaacaccagataagactctgtgat 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tttaatctatcttttttgacttttagtgacggaagcaaacaccagataagactctgtgat 377
Query: 178 agcaatgcttgcaagatgcgttgcattgaagtaatcagagcaagcctaatacattagaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 agcaatgcttgcaagatgcgttgcattgaagtaatcagagcaagcctaatacattagaaa 437
Query: 238 acagtgtttattactaaagacagcttcgtttgttttttgttttctttgacagggtttctc 297
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 acagtggccattactaaagacagcttcgtttgttttttgttttctttgacagggtttctc 497
Query: 298 tgtgtagccctggctgtcctggaactcactctgtagaccaggctggccttgaactcagaa 357
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 498 tgtgtagccctggctgtcctggaactcactctgtagaccaggctggcctcaaactcagaa 557
Query: 358 atctgcctgctgctgcctcccgagtgctgggattaaaggcgtgcgccaccatgcccggct 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 atctgcctgctgctgcctcccgagtgctgggattaaaggcgtgcgccaccatgcccggct 617
Query: 418 ctagatacagtttta---agttgactttcagagggcagtactgcttcatttatactgtgg 474
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 618 ctagatacagttttattaagttgactttcagagggcaatactgcttcatttatactgtgg 677
Query: 475 ttgaaaccacagtggagagcctgcatgtcttccctggggttgc 517
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttgaa-ccacagtggagagcctgcatgtcttccctggggttgc 719
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 919
Length adjustment: 10
Effective length of query: 507
Effective length of database: 909
Effective search space: 460863
Effective search space used: 460863
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no406_e18.g1 MSMg01no406_e18.g1 CHROMAT_FILE:
MSMg01no406_e18.g1 PHD_FILE: MSMg01no406_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:21:33 2005
(384 letters)
>mm_chr14_73748096_73748879
Length = 784
Score = 576 bits (298), Expect = e-169
Identities = 307/310 (99%)
Strand = Plus / Minus
Query: 1 actggactcagaaccctattgtgcttctgtaaatcacgggccaggaaggatttcctagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 actggactcagaaccctattgtgcttctgtaaatcacgggccaggaaggatttcctagca 251
Query: 61 gaggctgagggccaggaccaaagacagatgtttgagagggagagaaaacgtttttaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaggctgagggccaggaccaaagacagatgtttgagagggagagaaaacgtttttaattt 191
Query: 121 attttttaaaaaaattattcttaaggggaagagagaggcaggagaggggaggggaacgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 attttttaaaaaaattattcttaaggggaagagagaggcaggagaggggaggggaacgga 131
Query: 181 aggggagcaaaagaaaagaggcctgtgccagccagaggcatcagatccctagttttagaa 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aggggagcaaaagagaagaggcctgtgccagccagaggcatcagatccctagttttagaa 71
Query: 241 ttactgctggttgtgagctttgacctgggtgctgggaactgatcttgggtcttctgcaag 300
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 70 ttacagctggttgtgagctttgacctgggtgctgggaactgaacttgggtcttctgcaag 11
Query: 301 agcatacagg 310
||||||||||
Sbjct: 10 agcatacagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space: 290625
Effective search space used: 290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
