Query= MSMg01no407_j11.b1 MSMg01no407_j11.b1 CHROMAT_FILE:
MSMg01no407_j11.b1 PHD_FILE: MSMg01no407_j11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:16 2005
(603 letters)
>mm_chr14_71480733_71481735
Length = 1003
Score = 1143 bits (591), Expect = 0.0
Identities = 597/599 (99%)
Strand = Plus / Minus
Query: 5 gaattccatgttgaccatatggagacctgaatgtggctaggaggattagccaactgtagt 64
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gaattccatggagaccatatggagacctgaatgtggctaggaggattagccaactgtagt 744
Query: 65 tagctgtcctccagggactgatgatcctccagggagttaagtcaagggatcctgcaagtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tagctgtcctccagggactgatgatcctccagggagttaagtcaagggatcctgcaagtc 684
Query: 125 actctcacaggtgaccttgaactttaagggtataaagcattgtgcctaccatctaatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 actctcacaggtgaccttgaactttaagggtataaagcattgtgcctaccatctaatgaa 624
Query: 185 agaaagaaacctctaccaagaacttcctagaactaaaaggtcagggactgtctaatttat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 agaaagaaacctctaccaagaacttcctagaactaaaaggtcagggactgtctaatttat 564
Query: 245 tttttaaacccaattcaaggtaatactggcccagagatagggcaagggagctgggaagta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttttaaacccaattcaaggtaatactggcccagagatagggcaagggagctgggaagta 504
Query: 305 acaaccatgttgtcttcagaggtgggatttccttcttccaagcatcctaaggcacaatat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 acaaccatgttgtcttcagaggtgggatttccttcttccaagcatcctaaggcacaatat 444
Query: 365 tctgaagcttctatgtagaggtcaactggatatgatggaggtgacaccaatgggctagat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tctgaagcttctatgtagaggtcaactggatatgatggaggtgacaccaatgggctagat 384
Query: 425 gcagctcagtggtaaaatgcttatccatcatttgcaccacagcaaccaatccaacctaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcagctcagtggtaaaatgcttatccatcatttgcaccacagcaaccaatccaacctaaa 324
Query: 485 cgaaacccaagcaatagaacacaaagctatcagattactccctttccctaccatagtgta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cgaaacccaagcaatagaacacaaagctatcagattactccctttccctaccatagtgta 264
Query: 545 gaaaatccaggaagagagctcgtattaaaatgtacctctattggcatttggacttcact 603
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gaaaatccaggaagagagctcgtattaaaatgtacctctattggcatttggacttcact 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_j11.g1 MSMg01no407_j11.g1 CHROMAT_FILE:
MSMg01no407_j11.g1 PHD_FILE: MSMg01no407_j11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:16 2005
(510 letters)
>mm_chr14_71324316_71325224
Length = 909
Score = 872 bits (451), Expect = 0.0
Identities = 487/499 (97%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 12 aaatctgtaaaatacaggttaggttggatgatcacctacctggctcctcagaagatctca 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 aaatctgtaaaatacaggttaggttggatgatcacctacctggctcctcagaagatctca 271
Query: 72 gatgggcatgtgcagattggagccctacccttccctatgcccactatcagagggacaaga 131
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 272 gatgggcatgcgcagattggagccttacccttccctatgcccactatcagagggacaaga 331
Query: 132 gaatctgtctaggtgggaactggctgtctatggagtcagatggtgtctgtgataggtatc 191
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 332 gaatctgtctaggtgggaactggttggctatggagtcagatggtgtctgtgataggtatc 391
Query: 192 accgtggtacagctaagatctgtggggttgggacagccactgtagaggtattcttgtgat 251
||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 392 accatggtacagctaagatctgtggggttgggacagccactgtagaggtac-cttgtgat 450
Query: 252 tcctactgtgtacctcagacaatgcctcacaaatccaaaacactagggcaagagacccag 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 tcctactgtgtacctcagacaatgcctcacaaatccaaaacactagggcaagagacccag 510
Query: 312 cctgtctgtctcatggttggtcgtccatccagcggggtcagagttcaacttggggtagcc 371
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 511 cctgtctgtctcatggttggtcgtccatcctgcggggtcagagttcaacttggggtagcc 570
Query: 372 ttcccttcacacttagaggactatgcttccctttcagtggcagtggcagtggcagtggca 431
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 571 ttcccttcacacttagaggactatgcttccctttaagtggcagtggcagtggcagtgaca 630
Query: 432 gtggcagtggcaggtatatcccctctggatacagaagaacagttttggtggttacagggg 491
||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 631 gtggcagtgccaggtatatcccctcaggatacagaagaacagttttggtggttacagggg 690
Query: 492 tgggggagcatccttgttg 510
|||||||||||||||||||
Sbjct: 691 tgggggagcatccttgttg 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 909
Length adjustment: 10
Effective length of query: 500
Effective length of database: 899
Effective search space: 449500
Effective search space used: 449500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
