Query= MSMg01no408_b21.b1 MSMg01no408_b21.b1 CHROMAT_FILE:
MSMg01no408_b21.b1 PHD_FILE: MSMg01no408_b21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:59 2005
(495 letters)
>mm_chr14_31085597_31086491
Length = 895
Score = 934 bits (483), Expect = 0.0
Identities = 489/491 (99%)
Strand = Plus / Plus
Query: 5 gaattccaggatggtaacgctactgcagctggcagcctgcatatgaaatcacactgctaa 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaggatggaaatgctactgcagctggcagcctgcatatgaaatcacactgctaa 264
Query: 65 ttcacttctctcctccctaaggaagacaacactacccacacccctggttcatggataacc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcacttctctcctccctaaggaagacaacactacccacacccctggttcatggataacc 324
Query: 125 agagtctaccacgggcaaaaaagcatgtgtggctcagtcctaagcccagagagagacagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agagtctaccacgggcaaaaaagcatgtgtggctcagtcctaagcccagagagagacagc 384
Query: 185 aggcacaacagaaggggaagaattaagacagacctttgcctcaagatgcttggtgtgtaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggcacaacagaaggggaagaattaagacagacctttgcctcaagatgcttggtgtgtaa 444
Query: 245 taaaataaatacccttgcaaagagctgttcagatggcgcttgccttccaacagggcagac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taaaataaatacccttgcaaagagctgttcagatggcgcttgccttccaacagggcagac 504
Query: 305 aagcgaggtactgcatggctctatggaagaagggccgggggcagatagcctggtccatgc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagcgaggtactgcatggctctatggaagaagggccgggggcagatagcctggtccatgc 564
Query: 365 atgctccaggggtcttctctgtactcttccttaagcaaacagcttctctgactgataaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 atgctccaggggtcttctctgtactcttccttaagcaaacagcttctctgactgataaag 624
Query: 425 tgctaccctgtggttcctgggtcatacactgacctgggccctgaaggcagcagtgaaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgctaccctgtggttcctgggtcatacactgacctgggccctgaaggcagcagtgaaaga 684
Query: 485 ggcaaggtccc 495
|||||||||||
Sbjct: 685 ggcaaggtccc 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no408_b21.g1 MSMg01no408_b21.g1 CHROMAT_FILE:
MSMg01no408_b21.g1 PHD_FILE: MSMg01no408_b21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:59 2005
(466 letters)
>mm_chr14_31274732_31275597
Length = 866
Score = 545 bits (282), Expect = e-159
Identities = 340/388 (87%), Gaps = 45/388 (11%)
Strand = Plus / Minus
Query: 1 tgcttacatttggcttctccttaccagaaacaaaactggctctttgtgtggtttactttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgcttacatttggcttctccttaccagaaacaaaactggctctttgtgtggtttactttt 285
Query: 61 tagtgtaggtgaagattgccattaagcaattactgtatagtctatgttcagtctcaattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 284 tagtgtaggtgaagattgccattaagcaattactgtatagtctatgttcaatctcaattt 225
Query: 121 aatatcttttaaaattaacattattttatttatttatttatttatttatttatttattta 180
||||||||||||||||||||||||
Sbjct: 224 aatatcttttaaaattaacattat------------------------------------ 201
Query: 181 tttatttatttatttattattttacactccagattttatttcca-ccccccattcatcct 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 200 --------tttatttattattttacactccagattttatttccacccccccattcatcct 149
Query: 240 ctgactgtttcacatcccatacctcctccccaaacccctgtctccatgaggatgtcccta 299
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 148 ctgactgtttcacatcccatacctcctccccaaatccctgtctccatgaggatgtcccta 89
Query: 300 cccccaaccccctaaacaatgtatattttttaaaataaagtcttactattgtaaccctgg 359
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 88 cccccaaccccctaaacaatgtatatttttaaaaataaagtcttactattgtaaccctgg 29
Query: 360 ccagcctggaactaactcactatgtagg 387
||||||||||||||||||||||||||||
Sbjct: 28 ccagcctggaactaactcactatgtagg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
