Query= MSMg01no409_i09.b1 MSMg01no409_i09.b1 CHROMAT_FILE:
MSMg01no409_i09.b1 PHD_FILE: MSMg01no409_i09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:55 2005
(549 letters)
>mm_chr14_87317952_87318901
Length = 950
Score = 1009 bits (522), Expect = 0.0
Identities = 540/546 (98%), Gaps = 1/546 (0%)
Strand = Plus / Plus
Query: 5 ggaattcctcttatttc-catcctgatttccattagtataccaacggctgtcctgcatga 63
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 ggaattcctcttattcctcatcctgatttccattagtatgccaacggctgtcctgcatga 264
Query: 64 taaagtgtcacaaataacagttattaagaaggataaaagaatagatagattacgaagtcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taaagtgtcacaaataacagttattaagaaggataaaagaatagatagattacgaagtcc 324
Query: 124 aaactgtgatgtcatcacctgaattcttgtctttaatacctgaaaaaagaactttaaaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaactgtgatgtcatcacctgaattcttgtctttaatacctgaaaaaagaactttaaaga 384
Query: 184 gcagttccttaggcatttgtaggaaacagaatttcatcttaaatccttttcttattttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagttccttaggcatttgtaggaaacagaatttcatcttaaatccttttcttattttct 444
Query: 244 agtacatattaatcttttcaagattttaatcttgtttttttcatgaaggagacatatttg 303
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 445 agtacatattaatcttttcaagattttaatcttgtaatttgcatgaaggagacatatttg 504
Query: 304 aacttgggattcaagctaagaaattaaaatgattgaaaacaagacacaaaatgagcagat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aacttgggattcaagctaagaaattaaaatgattgaaaacaagacacaaaatgagcagat 564
Query: 364 ttcaagaaacaatcctcagtacatcgatacttcaaaatggtattcatatgtgatacttac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttcaagaaacaatcctcagtacatcgatacttcaaaatggtattcatatgtgatacttac 624
Query: 424 aaaggttctgagcaattttaggatctagaaatttaagttccttcattctcttcttaataa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaggttctgagcaattttaggatctagaaatttaagttccttcattctcttcttaataa 684
Query: 484 ctttcttctcatcaaagtcatttgtattccttttctctgtaagacaaagaagagattaat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctttcttctcatcaaagtcatttgtattccttttctctgtaagacaaagaagagattaat 744
Query: 544 gttaga 549
||||||
Sbjct: 745 gttaga 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 950
Length adjustment: 10
Effective length of query: 539
Effective length of database: 940
Effective search space: 506660
Effective search space used: 506660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no409_i09.g1 MSMg01no409_i09.g1 CHROMAT_FILE:
MSMg01no409_i09.g1 PHD_FILE: MSMg01no409_i09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:55 2005
(211 letters)
>mm_chr14_87453743_87454353
Length = 611
Score = 400 bits (207), Expect = e-116
Identities = 210/211 (99%)
Strand = Plus / Minus
Query: 1 atgtctagttcttttcacttatgcagctgtctgtggctggtgaggccatggaacctagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atgtctagttcttttcacttatgcagctgtctgtggctggtgaggccatggaacctagaa 352
Query: 61 gagaattgctactgctactttttcctgcttgccagtaattgttacagctgcttcaagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gagaattgctactgctactttttcctgcttgccagtaattgttacagctgcttcaagttt 292
Query: 121 cttccatcttgctagacatgaacacacacctaataaatacctatacacgcaatgttagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cttccatcttgctagacatgaacacacacctaataaatacctatacacgcaatgttagaa 232
Query: 181 tatttaagtctcagagagagtacttgtagag 211
|| ||||||||||||||||||||||||||||
Sbjct: 231 tagttaagtctcagagagagtacttgtagag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 611
Length adjustment: 9
Effective length of query: 202
Effective length of database: 602
Effective search space: 121604
Effective search space used: 121604
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
