Query= MSMg01no412_d01.b1 MSMg01no412_d01.b1 CHROMAT_FILE:
MSMg01no412_d01.b1 PHD_FILE: MSMg01no412_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:28 2005
(504 letters)
>mm_chr14_20924052_20924951
Length = 900
Score = 692 bits (358), Expect = 0.0
Identities = 392/410 (95%), Gaps = 13/410 (3%)
Strand = Plus / Minus
Query: 104 acgtgaggatgaccacaaccaacttctcctcctcttcttcctcttc---ctcttcctct- 159
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 897 acgtgaggatgaccacaaccaacttctcctcctcttcttcctcttccttctcttcctctt 838
Query: 160 -----tcttcctcttcctcatcttcctcctccttggcttcctcttctccttcctctttaa 214
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ccttctcttcctcttcctcctcttcctcctccttggcttcctcttctccttcctctttaa 778
Query: 215 tgtagactctgagggtcaaacttgggtcctcatctgtctacagcaagcactttacaggct 274
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 777 tgtagactctgagggtcaaacttgggtcctcatccgtctacagcaagcactttacaggct 718
Query: 275 gatttatctccctagccttttgattctttctttttagttctgaatgatcgttttaaattt 334
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 717 gggttatctccctagccttttgattctttctttttagttctgaacgatcgttttaaattt 658
Query: 335 ctgcacaacctgttagttagtcccttgatattttgcactctcctctagttttcttatggg 394
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ctgcacaacct----gttagtcccttgatattttgcactctcctctagttttcttatggg 602
Query: 395 gaagaaattagtcaatgcactacatccgaggagggaacacaccctccacacacccagcca 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaagaaattagtcaatgcactacatccgaggagggaacacaccctccacacacccagcca 542
Query: 455 gagctccttgtgaaaacccagacaagggatgaagttcagtgctataaaac 504
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gagctccttgtgaaaacccagacaagggatgaagttcagtgctataaaac 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 900
Length adjustment: 10
Effective length of query: 494
Effective length of database: 890
Effective search space: 439660
Effective search space used: 439660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_d01.g1 MSMg01no412_d01.g1 CHROMAT_FILE:
MSMg01no412_d01.g1 PHD_FILE: MSMg01no412_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:28 2005
(463 letters)
>mm_chr14_20730526_20731388
Length = 863
Score = 820 bits (424), Expect = 0.0
Identities = 453/464 (97%), Gaps = 3/464 (0%)
Strand = Plus / Plus
Query: 3 tgcctttgaactgtccctcaaagctgctggacagagacctaaccaggctcacatgccatc 62
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||
Sbjct: 203 tgcctttgaactgtccctcaaagctactggacagagacttaaccaggctcacatgccatc 262
Query: 63 atgtgtcaaggagcctcccagtctcccagcagccttgcctggttctttttctaccacagc 122
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atatgtcaaggagcctcccagtctcccagcagccttgcctggttctttttctaccacagc 322
Query: 123 agctggtaaggcccccgagtcctggctggacaggacacttaggtgagtctagaacagtca 182
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 323 agctggtaaggcccccgagtcctggctggacaggacacttaggtgagtctggaacagtaa 382
Query: 183 gagtgctaagtgagcacagaccacaggacccacctctatgagaacccagagttcactaca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gagtgctaagtgagcacagaccacaggacccacctctatgagaacccagagttcactaca 442
Query: 243 gtggatcctgtttcccaccctcatgtccccagttccctttgaatgatttttccacccttt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtggatcctgtttcccaccctcatgtccccagttccctttgaatgatttttccacccttt 502
Query: 303 tctt---tcctcaaagctcttcttgtacccccttgctctctgttctcattctcaggtggt 359
|||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 503 tcttctttcctcaaagctcttcttgtacccccttgctctctgtgctcattctcagctggt 562
Query: 360 cactttgcttcttatctcagagagaaaacagcaacaactagatgagaatgtgcatatccg 419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 caatttgcttcttatctcagagagaaaacagcaacaactagatgagaatgtgcatatccg 622
Query: 420 ccctcctggatgtcccctcccccaccccaccccacctgagcatc 463
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccctcctggatgtcccctcccccaccccaccccacctgagcatc 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space: 386409
Effective search space used: 386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
