Query= MSMg01no413_e16.b1 MSMg01no413_e16.b1 CHROMAT_FILE:
MSMg01no413_e16.b1 PHD_FILE: MSMg01no413_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:56 2005
(571 letters)
>mm_chr14_29827805_29828777
Length = 973
Score = 969 bits (501), Expect = 0.0
Identities = 550/575 (95%), Gaps = 18/575 (3%)
Strand = Plus / Plus
Query: 1 tcactctcatccgcatgcctttagaatgctaacctgcctccagagccaaatagaattgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactctcatccgcatgcctttagaatgctaacctgcctccagagccaaatagaattgca 260
Query: 61 gcctgcctatgtgaaacccatggcctcctccctcctctcctgcagctgtccttgggtttg 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctgcttatgtgaaacccatggcctcctccctcctctcctgcagctgtccttgggtttg 320
Query: 121 gccaccttcccttggaatcaggtcactgaagcatgcactctgacaaggatatggggacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccaccttcccttggaatcaggtcactgaagcatgcactctgacaaggatatggggacat 380
Query: 181 tttgccatctgtttttttttttt--caaccaaagcagacattcaaactgagagacagact 238
||||||||||||||||||||||| ||||||||||||||||| ||| ||
Sbjct: 381 tttgccatctgttttttttttttttcaaccaaagcagacatt-----tga--------ct 427
Query: 239 caggtgtatctggaggtttcaaggcagacagagaacccctccctcagcccagaaagagat 298
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 caggtgtatctggaggcatcaaggcagacagagaacccctccctcagcccagaaagagat 487
Query: 299 gtcacgtctgggacggacatgagaggcaagctcgaggtcagacacaggaatctgtgaaca 358
|||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtcatgtctgggatggacatgagaggcaagctcgaggtcagacacaggaatctgtgaaca 547
Query: 359 tttcccatatactcccagagctcagcaagtcaccagcggacaggtcatctcaattttcta 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tttcccatatactcccagagctcagcaagtcaccagcggacaggtcatctcaattttcta 607
Query: 419 atagataaaacgtatccttactatttaaacagaggcagcccctttccttcatagctttca 478
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct: 608 atagataaaacgtatccttactatttaagcagag-cagcccctttccttcatagctttca 666
Query: 479 aattatagctttcaaaatttggttgcagtgagttcagtatattgaggattaaaaaaaa-- 536
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 667 aattatagctttcaaaatttggttgcagtgagttcagtacattgaggattaaaaaaaaaa 726
Query: 537 tgtccttttgtctaaaattaccactcttacccaat 571
|||||||||||||||||||||||||||||||||||
Sbjct: 727 tgtccttttgtctaaaattaccactcttacccaat 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 973
Length adjustment: 10
Effective length of query: 561
Effective length of database: 963
Effective search space: 540243
Effective search space used: 540243
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e16.g1 MSMg01no413_e16.g1 CHROMAT_FILE:
MSMg01no413_e16.g1 PHD_FILE: MSMg01no413_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:56 2005
(475 letters)
>mm_chr14_29977932_29978806
Length = 875
Score = 911 bits (471), Expect = 0.0
Identities = 474/475 (99%)
Strand = Plus / Minus
Query: 1 tgttcgcttgacccaccaggcttgtaactgaacccagctttaacaaagataattatgtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgttcgcttgacccaccaggcttgtaactgaacccagctttaacaaagataattatgtaa 616
Query: 61 ttgacttaacagttggcagaatggttcacaataaccagtgcatgaagttccctcttttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttgacttaacagttggcagaatggttcacaataaccagtgcatgaagttccctcttttct 556
Query: 121 tattccttacaggtagactcatgatatcctaagtccagacatggtcagggaagtgccgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tattccttacaggtagactcatgatatcctaagtccagacatggtcagggaagtgccgaa 496
Query: 181 ccattaacagagcctggctttggattctagcacttaaggcccttggttgtatttaccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ccattaacagagcctggctttggattctagcacttaaggcccttggttgtatttaccaag 436
Query: 241 cctgactcttgtatcagaacggcaaagctcttttcatgactcgtcctcctggctttttgc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cctgactctagtatcagaacggcaaagctcttttcatgactcgtcctcctggctttttgc 376
Query: 301 taccggtctgattaaatattcagtgtctgctgtagctgctccattcaatttgctttcccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 taccggtctgattaaatattcagtgtctgctgtagctgctccattcaatttgctttcccg 316
Query: 361 atgaagaccaaataaatgaatgaatgttaacaacattaattatgtttaatctaataagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgaagaccaaataaatgaatgaatgttaacaacattaattatgtttaatctaataagat 256
Query: 421 ctcatgtattaattggcaaaacagcaaacaccagaattctggaattcaccggctt 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctcatgtattaattggcaaaacagcaaacaccagaattctggaattcaccggctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
