Query= MSMg01no413_m11.b1 MSMg01no413_m11.b1 CHROMAT_FILE:
MSMg01no413_m11.b1 PHD_FILE: MSMg01no413_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:34 2005
(392 letters)
>mm_chr14_101403743_101404534
Length = 792
Score = 603 bits (312), Expect = e-177
Identities = 332/340 (97%), Gaps = 3/340 (0%)
Strand = Plus / Minus
Query: 53 ttctttctttaaaaaaaaaaaactctaaaagatttattttaagtgtatattatatgtatg 112
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ttctttcttt---aaaaaaaaactctaaaagatttattttaagtgtatattatatgtatg 736
Query: 113 tgtatatttgtgagtgcagctgccctcgaggtcagaagtgagtgagtgttggaacctttt 172
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 735 tgtatatttgtgagtgcaggtgccctcgaggccagaagtgagtgagtgttggaacctttt 676
Query: 173 gagatggaattatatgctattttcacttaactgctatgtgtcttaggaatgaggtcccct 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gagatggaattatatgctattttcacttaactgctatgtgtcttaggaatgaggtcccct 616
Query: 233 gcaagaacaatcagcagtgttctctgtaaatctccagccgagagaggctttttcttaatt 292
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 gcaagaacaatcagcactgttctctgtaaatctccagccgagagaggctttttcttaatt 556
Query: 293 tgcaattatcactttgattggaacttaacactaacgatttcttccataaaccatcctgcc 352
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 555 tgcaattatcactttgattggaacttaacactaacgatttctcccataaaccatcctgtc 496
Query: 353 taacctctttcaatgttagttttgagtgaagaactacaaa 392
||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taacctctttcaatgttagttttgagtgaagaactacaaa 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_m11.g1 MSMg01no413_m11.g1 CHROMAT_FILE:
MSMg01no413_m11.g1 PHD_FILE: MSMg01no413_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:34 2005
(521 letters)
>mm_chr14_101254132_101255057
Length = 926
Score = 861 bits (445), Expect = 0.0
Identities = 502/523 (95%), Gaps = 5/523 (0%)
Strand = Plus / Plus
Query: 1 caggactttattccaatgtatgtgctgtttgcatgactatgatatatgccatgtaacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggactttattccaatgtatgtgctgtttgcatgactatgatatatgccatgtaacaca 260
Query: 61 gttttaggtaaaataatcatctatacattaatatctgtgccatcaattacattcacagaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gttttaggtaaaacaatcatctatacattaatatctgtgccatcaattacattcatagaa 320
Query: 121 tgtcttaggaaaagagaaag-tttatggaaaagacaaaaa----atagtatctgctagtt 175
||||||||||||||||||| ||||| ||||||||||||| ||||||| | ||||||
Sbjct: 321 agtcttaggaaaagagaaagatttatagaaaagacaaaaaatagatagtatttcctagtt 380
Query: 176 catttctattggtacagtagactagcttagagtgggtaatataaagacatgcttagagtt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttctattggtacagtagactagcttagagtgggtaatataaagacatgcttagagtt 440
Query: 236 ttattttggttcataggactttaaatccaagaccatataaccaaatgtgattggcttcta 295
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 ttattttggttcataggactttaagtccaagaccatataaccaaatgtgattggcttcta 500
Query: 296 ttgagaacattgtgcttgttgtacccacagcagaaaacagaatcaaaagtgacatcacac 355
|||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ttgagaacattgtgcttgttttacccacagcagaaaacagaaacaaaagtgacatcacag 560
Query: 356 aaacatacaaaatgtctaccagaaagggagaagccagacacaaagaaacagtatgctgca 415
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaacgtacaaaatgtctaccacaaagggagaagccagacacaaagaaacagtatgctgca 620
Query: 416 aggacttagagtacttgtgagcagaaggagctattgaagaacctactgacagggtagtat 475
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 621 aggacttagagtacttgtgagcagaaggagctattgaagaacctactgacagagtagcat 680
Query: 476 gtagttaagtatgagggttgtcccctgtctgttcatagcactc 518
|| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 681 gtggttaagtatgagggttggcccctgtctgttcatagcactc 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 926
Length adjustment: 10
Effective length of query: 511
Effective length of database: 916
Effective search space: 468076
Effective search space used: 468076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
