Query= MSMg01no413_o01.b1 MSMg01no413_o01.b1 CHROMAT_FILE:
MSMg01no413_o01.b1 PHD_FILE: MSMg01no413_o01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:42 2005
(559 letters)
>mm_chr14_103182390_103183348
Length = 959
Score = 988 bits (511), Expect = 0.0
Identities = 544/555 (98%)
Strand = Plus / Minus
Query: 5 gaattctgtcttctccttgaagggaagatgatgtgcaagcttctgcggtgagcatggagg 64
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 759 gaattctgtcttctccttgaagggaagatgatgtgcaaacttctggggtgagcatggagg 700
Query: 65 ctggagcatagtaggagagtcatttgcttagaaggatgggctgatctcataacaaggcaa 124
||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 699 ctggagcatagtaggagagtcgtttccttagaaggatgggctgatctcataacaaggcaa 640
Query: 125 gaaaaagatgctaaagtttgggatagtaaggcaggcttgggagagagagattgaggattt 184
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 639 gaaaaagatactaaagtttgggatagtaaagcaggcttgggagagagagattgaggattt 580
Query: 185 agaaagtcatgtgaaagctgcccctcaagctggaagatggcagaccatgggctcataatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 agaaagtcatgtgaaagctgcccctcaagctggaagatggcagaccatgggctcataatt 520
Query: 245 ctggtaagagaagagacagcaagagacatggctgtgtagtcaccagggacttctctgcac 304
|||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||
Sbjct: 519 ctggtaagagaagagacagcaagagatatggctgtgtagccacgagggacttctctgcac 460
Query: 305 ctttaggcagggcactatttgtccctgtgcaaggatcaatggtcaaaagaaaccatgata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ctttaggcagggcactatttgtccctgtgcaaggatcaatggtcaaaagaaaccatgata 400
Query: 365 atggcagggtaagtggtctttgttgggtggttctggatgatgtctgtgatagggagaatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atggcagggtaagtggtctttgttgggtggttctggatgatgtctgtgatagggagaatg 340
Query: 425 agagcacactgagaaagcaagcagtgatggtcagtggaaaactaagagccttccctaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 agagcacactgagaaagcaagcagtgatggtcagtggaaaactaagagccttccctaaga 280
Query: 485 tttatgctggaggtacgtgttgtgatagtccagatgctatccttgatccaatcttttggg 544
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tttatgttggaggtacgtgttgtgatagtccagatgctatccttgatccaatcttttggg 220
Query: 545 acaagtgtttgtatg 559
| |||||||||||||
Sbjct: 219 aaaagtgtttgtatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 959
Length adjustment: 10
Effective length of query: 549
Effective length of database: 949
Effective search space: 521001
Effective search space used: 521001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_o01.g1 MSMg01no413_o01.g1 CHROMAT_FILE:
MSMg01no413_o01.g1 PHD_FILE: MSMg01no413_o01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:31:42 2005
(506 letters)
>mm_chr14_103001033_103001937
Length = 905
Score = 926 bits (479), Expect = 0.0
Identities = 500/507 (98%), Gaps = 2/507 (0%)
Strand = Plus / Plus
Query: 1 taaggcaattagcagaacaatcttcaggcaggaaaaacacaagaaaaacaaacagcgttt 60
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 taaggcaattggcagaacaatcttcaggcaggaaaaacacaagaaaaacaaacagcattt 260
Query: 61 agatgaaatgcagaaaataagtaagggcaacaatatatgacttttttttaaggggaatga 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 agatgaaatgcagaaaataagtaagggcaacaatatatgacttttttt-aaggggaatga 319
Query: 121 aaagggaaatggagaattagtttcagaagagtaatgtccaaaacactctcaaattcaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagggaaatggagaattagtttcagaagagtaatgtccaaaacactctcaaattcaatg 379
Query: 181 gcaaacatttaagaactacacaaacttcttataagataagggcaaagaatccaaaggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcaaacatttaagaactacacaaacttcttataagataagggcaaagaatccaaaggaga 439
Query: 241 aattttgtaattaaatcagcacagtaaacagtcttgaacacagaaagaaaaacaaattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aattttgtaattaaatcagcacagtaaacagtcttgaacacagaaagaaaaacaaattat 499
Query: 301 catgtctaaattcagtcaaatgaaagggaaaatgtttctcattagaaatactggacagag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 catgtctaaattcagtcaaatgaaagggaaaatgtttctcattagaaatactggacagag 559
Query: 361 acagacctggtggtgcagactgtaacgtcaaccttgggaagtagatataagaggatcaag 420
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 560 acaaacctggtggtgcagactgtaaagtcaaccttgggaagtagatataagaggatcaag 619
Query: 421 gatagcttcagctacataaagaattt-tggctagcctgggctttgtaagatcctctccta 479
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 620 gatagcttcagctacataaagaatttgtggctaccctgggctttgtaagatcctctccta 679
Query: 480 taaacatagagaggaagggagggggca 506
|||||||||||||||||||||||||||
Sbjct: 680 taaacatagagaggaagggagggggca 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
