Query= MSMg01no414_i15.b1 MSMg01no414_i15.b1 CHROMAT_FILE:
MSMg01no414_i15.b1 PHD_FILE: MSMg01no414_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:37 2005
(250 letters)
>mm_chr14_103222702_103223351
Length = 650
Score = 404 bits (209), Expect = e-117
Identities = 241/254 (94%), Gaps = 8/254 (3%)
Strand = Plus / Minus
Query: 1 acaccaaggcgctagggagctttcanagacagtagaaaggatgacgtcagatatatgaga 60
||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 450 acaccaaggcgctagagagctttcaaagacagtagaaaggatgacgtcagatatatgaga 391
Query: 61 caataaacgttgttcccagtaaataatagcaagagtagcatcaatctgaggcatagctga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 390 caataaacgttgttcccagtaaataatagcaagagtagcatcagtctgaggcatagctga 331
Query: 121 cagctgctgggatgatgtcctttcagacatagcatgggcagcagcctgtgctagtttgtg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cagctgctgggattatgtcctttcagacatagcatgggcagcagcctgtgctagtttgtg 271
Query: 181 a---tgttgatagtttttgtgatcattactaaccaggcaatcatgtagaagat-cttttc 236
| || | ||||||||||||||||||||||||||||||||||| ||||||| | ||||
Sbjct: 270 actctg--g-tagtttttgtgatcattactaaccaggcaatcatggagaagatgc-tttc 215
Query: 237 ttcttagaaccttc 250
||||||||||||||
Sbjct: 214 ttcttagaaccttc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no414_i15.g1 MSMg01no414_i15.g1 CHROMAT_FILE:
MSMg01no414_i15.g1 PHD_FILE: MSMg01no414_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:37 2005
(499 letters)
>mm_chr14_103069055_103069952
Length = 898
Score = 818 bits (423), Expect = 0.0
Identities = 480/499 (96%), Gaps = 1/499 (0%)
Strand = Plus / Plus
Query: 1 actttttgcatttatgaaattgttcaaagaataaaaaaaatacaatatgtgaagataaat 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 actttttgcatttatgaaattgttcaaagaataaaaaaa-tacaatatgtgaagataaat 259
Query: 61 tgagtcagaaattctcaatataataagcagagctgaggtctggtgaataatttaattaag 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 260 tgagtcagaaattctcaatataataagcagagctgaggcctggtgaataatttaattaag 319
Query: 121 aatacacacactgtgtaaatggcgagactcctgttctttcttctagaagtctggtgtgaa 180
||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 320 aatacacacactgtgtaaatggcgagattcctgttctttcccctagaagtctggtgtgaa 379
Query: 181 cccttcagacagaaatctgaccaagtccagagaaagaaacatatattctggtcattgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccttcagacagaaatctgaccaagtccagagaaagaaacatatattctggtcattgatg 439
Query: 241 gattgatgcaccatctatttattaatacttttttcatgtttatgcatagtgactaaacag 300
||||||||||||| |||||||||||| |||| ||||||||||||||| |||| ||||||
Sbjct: 440 gattgatgcaccagctatttattaatgctttcttcatgtttatgcattgtgattaaacaa 499
Query: 301 cctctggccgtctagttcttaaaaagcagtggaagccaagaatcatgagtcactccagga 360
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cctcttgccgtctagttcttaaaaagcagtggaagccaagaatcatgagtcactccagga 559
Query: 361 aagttcctagcttgaaagggagagcccaagatttccccaaaatacaaattaacaaaagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagttcctagcttgaaagggagagcccaagatttccccaaaatacaaattaacaaaagga 619
Query: 421 aacgaacactttgatatgcaaacataaattttgaattatcgttgaaatcctcaaagagat 480
||||||||||||||||||||| |||||||||| ||| ||| |||||| ||||| ||||||
Sbjct: 620 aacgaacactttgatatgcaagcataaattttaaataatcattgaaaccctcatagagat 679
Query: 481 gaataaacagatctaattc 499
| |||||||||||||||||
Sbjct: 680 ggataaacagatctaattc 698
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 898
Length adjustment: 10
Effective length of query: 489
Effective length of database: 888
Effective search space: 434232
Effective search space used: 434232
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|