Query= MSMg01no414_p12.b1 MSMg01no414_p12.b1 CHROMAT_FILE:
MSMg01no414_p12.b1 PHD_FILE: MSMg01no414_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:12 2005
(608 letters)
>mm_chr14_103626326_103627333
Length = 1008
Score = 1100 bits (569), Expect = 0.0
Identities = 596/605 (98%), Gaps = 2/605 (0%)
Strand = Plus / Minus
Query: 5 gaattcacccaga-ttcgcatggttattgtacatagtttgttccaaatggaatctcatga 63
||||||||||| | || ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 808 gaattcacccaaagtt-gcatgattattgtacatagtttgttccaaatggaatctcatga 750
Query: 64 ctctggaggctgaagcttctacatgtatctagttaagctgcttttatgctcagaagtgga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ctctggaggctgaagcttctacatgtatctagttaagctgcttttatgctcagaagtgga 690
Query: 124 aatctttagttgaacactgactgtggagctcctcatccaggagttcccgtcaagctcagt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aatctttagttgaacactgactgtggagctcctcatccaggagttcccgtcaagctcagt 630
Query: 184 cgttcgttaggttcataactcaggagctccaaatcaggacactactgtttcagttgagat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 cgttcgttaggttcataactcaggagctccaaatcaggacactactgtttcagttgagat 570
Query: 244 tgaacaaatgaataatttttattagcataaaatttgaagaccttaatattaaatgtctta 303
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 569 tgaacaaatgaataatttttattagcataaaatttgaagatcttattattaaatgtctta 510
Query: 304 ctaactttaatgagccttaaagcttgtcattttcgatatcatcctattccttcttgcttt 363
||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 509 ctaactttaatcacccttaaagcttgtcatttttgatatcatcctattccttcttgcttt 450
Query: 364 tagggtgattttccagttcaagagttcaaagaagtcaaataatggtaccgatgtaaatgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tagggtgattttccagttcaagagttcaaagaagtcaaataatggtaccgatgtaaatgc 390
Query: 424 tggtcagatacctcaactgttatacaggtattaaagttaactaactttgagttaactaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tggtcagatacctcaactgttatacaggtattaaagttaactaactttgagttaactaat 330
Query: 484 acaacttagtcatttgctatgctgaaataaaatcactataaattatgcagcagtggagaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acaacttagtcatttgctatgctgaaataaaatcactataaattatgcagcagtggagaa 270
Query: 544 attattcaagcactgaggacattaatgttaccctggtagaatacagttacttaaattttt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 attattcaagcactgaggacattaatgttaccctggtagaatacagttacttaaattttt 210
Query: 604 gttag 608
|||||
Sbjct: 209 gttag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1008
Length adjustment: 10
Effective length of query: 598
Effective length of database: 998
Effective search space: 596804
Effective search space used: 596804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_p12.g1 MSMg01no414_p12.g1 CHROMAT_FILE:
MSMg01no414_p12.g1 PHD_FILE: MSMg01no414_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:12 2005
(577 letters)
>mm_chr14_103438847_103439822
Length = 976
Score = 944 bits (488), Expect = 0.0
Identities = 547/578 (94%), Gaps = 21/578 (3%)
Strand = Plus / Plus
Query: 1 ctgtcagtttttattcaactgagattttcgcttcattccctaaagccactttactaacag 60
|||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||
Sbjct: 201 ctgtcagtttttattcaactcagatttttgctt-attccctaaagccactttactaacag 259
Query: 61 ctaggactgcaaggcggcctgccaaatgacagtctcctgccaacagcactttgttctaag 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctaggactgcaaggtggcctgccaaatgacagtctcctgccaacagcactttgttctaag 319
Query: 121 ggttctgggaccctttcaacttctatacttcccattctgaagtcgtaaccctatctgctg 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 320 ggttctgggaccctttcaacttctataattcccattctgaagtcgtaaccctatctgctg 379
Query: 181 ttaggacaaggcatagttaagggggtagcagtttgggatcttccaaacatcccttctata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttaggacaaggcatagttaagggggtagcagtttgggatcttccaaacatcccttctata 439
Query: 241 gggtagtt-aatctatatagccatttcaagtttgtactattttaggcaagaaaagatgaa 299
||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gggga-ttgaatctatatagccatttcaagtttgtactattttaggcaagaaaagatgaa 498
Query: 300 ttttttagaagcttaataaataggggaagcttaataaataggggtactaaagagcaatac 359
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 499 ttttttagaagcttaataaatagggg------------------tactaaagagcaatac 540
Query: 360 taaagagtattttctaaaggtcctgtgaggggaggcaatcaggacattcgatgtcatatc 419
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 541 taaagagtattttctaaaggccctgtgaggggaggcaatcaggacattcgatgtcatatc 600
Query: 420 ttgaaccatgaaccaatggttctgcttgaagaagtgcactttgtcagttttgaattattc 479
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 601 ttgaaccatgaaccaatggttctgcttgaagaagtgcactctgtcagttttgaattattc 660
Query: 480 ctcattgattcacatagacaattctcttctgtaggaatgaattttctgagaactgctgga 539
|||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 661 ctcattgattcacacagacaattctcttctgtaggaatggattttctgagaactgctgca 720
Query: 540 tgattcttgcctttacaaatcattcactaagcctgtaa 577
||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgattcttgcctttacaaatcattcactaagcctgtaa 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 976
Length adjustment: 10
Effective length of query: 567
Effective length of database: 966
Effective search space: 547722
Effective search space used: 547722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
