Query= MSMg01no415_e14.b1 MSMg01no415_e14.b1 CHROMAT_FILE:
MSMg01no415_e14.b1 PHD_FILE: MSMg01no415_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:37 2005
(351 letters)
>mm_chr14_108236404_108237154
Length = 751
Score = 661 bits (342), Expect = 0.0
Identities = 345/346 (99%)
Strand = Plus / Minus
Query: 5 gaattcattgtcttttttcttcttgcactatgactaaagtcatgtgattagaacaatatt 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaattcattgccttttttcttcttgcactatgactaaagtcatgtgattagaacaatatt 491
Query: 65 ttcccttgacttacaattggttgccaatacatctctgacacagaatccccaggagaatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttcccttgacttacaattggttgccaatacatctctgacacagaatccccaggagaatgc 431
Query: 125 gcacacaatggttgtacaagcttagatcatttctttgctttacttagtatgcctctgctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gcacacaatggttgtacaagcttagatcatttctttgctttacttagtatgcctctgctt 371
Query: 185 cctttctctcttccagcaattatggaaagtttccttttcagcttttatttgcattattga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 cctttctctcttccagcaattatggaaagtttccttttcagcttttatttgcattattga 311
Query: 245 aatgatatataagtatcatatttattttccagccaaggagaatggtagctagctattaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aatgatatataagtatcatatttattttccagccaaggagaatggtagctagctattaat 251
Query: 305 ttgtgtatatatgccagtggaggattggggtggggtagggggacgg 350
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgtgtatatatgccagtggaggattggggtggggtagggggacgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_e14.g1 MSMg01no415_e14.g1 CHROMAT_FILE:
MSMg01no415_e14.g1 PHD_FILE: MSMg01no415_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:37 2005
(418 letters)
>mm_chr14_108072202_108073022
Length = 821
Score = 727 bits (376), Expect = 0.0
Identities = 408/420 (97%), Gaps = 5/420 (1%)
Strand = Plus / Plus
Query: 3 tagtggcaggtgtgctgaattaataaattgttgttttatgaaatataactattatacaaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tagtggcaggtgtgctgaattaataaattgttgttttatgaaatataactattatacaaa 262
Query: 63 tattaaatatacatctacaaattggataatgtttatgcaagtgtgaagcatgttcatatg 122
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 tattaaatatacatctacaaattggataatgtttatgtaagtgtgaagcatgttcatatg 322
Query: 123 gatagtcacaccttgtgtgtgcttggctgtgcatactctcaggctggggggg---cattg 179
|||| ||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 323 gatattcacaacttgtgtgtgcttggctgtgcatactctcaggctggggggggggcattg 382
Query: 180 catgaccttgtttatcactctctcctgtgttcttagaaatatgcttttttgagaatatta 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 383 catgaccttgtttatcactctctcctgtgttcttagaaatatgcttttttgagaatataa 442
Query: 240 ttatataaataatcacattgttcctgttccatattctttctcctgtccgttcttgaaatc 299
| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 taatagaaaaaatcacattgttcctgttccatattctttctcctgtccgttcttgaaatc 502
Query: 300 catcttgattactcttaagtgcatgttctctgtttcttttactttgttgtgtgcatgtgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 catcttgattactcttaagtgcatgttctctgtttcttttactttgttgtgtgcatgtgt 562
Query: 360 atgtttgtgtgtttggc-aaaacaaatgcaatgtgctattgttaagtatgtattttgtta 418
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atgtttgtgtgtttg-ctaaaacaaatgcaatgtgctattgttaagtatgtattttgtta 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 821
Length adjustment: 9
Effective length of query: 409
Effective length of database: 812
Effective search space: 332108
Effective search space used: 332108
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
