Query= MSMg01no415_g23.b1 MSMg01no415_g23.b1 CHROMAT_FILE:
MSMg01no415_g23.b1 PHD_FILE: MSMg01no415_g23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:49 2005
(552 letters)
>mm_chr14_75205330_75206281
Length = 952
Score = 1038 bits (537), Expect = 0.0
Identities = 546/549 (99%)
Strand = Plus / Minus
Query: 4 ggaattcattggcctgcatttgtgtagcaagaagagtagccaaaccgtgatcaaatttct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ggaattcattggcctgcatttgtgtagcaagaagagtagccaaaccgtgatcaaatttct 693
Query: 64 cttgctgggaagtccctctgtatcactctatcttaccagctccttgttggatacacttct 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cttcctgggaagtccctctgtatcactctatcttaccagctccttgttggatacacttct 633
Query: 124 gagaggccaaggaggcctgactcagtgtagcatcagagaatcacgagggaggaaagtgag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gagaggccaaggaggcctgactcagtgtagcatcagagaatcacgagggaggaaagtgag 573
Query: 184 gccagataaagctttgcaaaccccgttatcagtttcacatctcttcccaaccctgactct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gccagataaagctttgcaaaccccgttatcagtttcacatctcttcccaaccctgactct 513
Query: 244 aaagtcaggattatccgtggagctttctagagggcccgtctttacttgagattggatttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aaagtcaggattatccgtggagctttctagagggcccgtctttacttgagattggatttg 453
Query: 304 cttaggtgtgttgggggctagttcctttcataagctccacaattgattttcctgcattga 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 452 cttaggtgtgttgggggctagttcctttcataagctccacagttgattttcctgcattga 393
Query: 364 taaaaaatcaggcctgagagctgctgttccacactgagcccctcacatggaactagagtt 423
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 taaagaatcaggcctgagagctgctgttccacactgagcccctcacatggaactagagtt 333
Query: 424 ggaagcctaggaattgatacagctccactctggggagccaggctggtcttatgggaagac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ggaagcctaggaattgatacagctccactctggggagccaggctggtcttatgggaagac 273
Query: 484 ccagtgtccttgtctgttgcctgactggccatggagcaagtggaagcctggagatgaact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ccagtgtccttgtctgttgcctgactggccatggagcaagtggaagcctggagatgaact 213
Query: 544 gagttttcc 552
|||||||||
Sbjct: 212 gagttttcc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space: 510564
Effective search space used: 510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_g23.g1 MSMg01no415_g23.g1 CHROMAT_FILE:
MSMg01no415_g23.g1 PHD_FILE: MSMg01no415_g23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:49 2005
(245 letters)
>mm_chr14_75026385_75027029
Length = 645
Score = 424 bits (219), Expect = e-123
Identities = 243/263 (92%), Gaps = 19/263 (7%)
Strand = Plus / Plus
Query: 1 ataaaatatatttaaatcaacaaaccattggccaacgtaaccaaaagtcagagaggaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ataaaatatatttaaatcaacaaaccattggccaacgtaaccaaaagtcagagaggaaac 241
Query: 61 acaaattaataaaattggagatg-------------------gagagagagagagagaga 101
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 242 acaaattaataaaattggagatggagagagagagagaagagagagagagagagagagaga 301
Query: 102 gagagagagagagagagagagagagagagatttctactggtgcctatgaaatttggggaa 161
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 302 gagagagagagagagagagagagagagagatttctactggtgccaatgaaatttggggaa 361
Query: 162 tcaatagaaaatactctatgttctaaaaacagatggaaagcctagcagaaataataaact 221
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcaatagaaaatactctatgttctaaaaacagatggaaagcctagcagaaataataaact 421
Query: 222 ccaagtgatatgtgacctaccaa 244
|||||||||||||||||||||||
Sbjct: 422 ccaagtgatatgtgacctaccaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
