Query= MSMg01no415_h13.b1 MSMg01no415_h13.b1 CHROMAT_FILE:
MSMg01no415_h13.b1 PHD_FILE: MSMg01no415_h13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:52 2005
(459 letters)
>mm_chr14_57142872_57143729
Length = 858
Score = 818 bits (423), Expect = 0.0
Identities = 435/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Minus
Query: 1 ctctgtggtcatagcacttgtgtagacacacctgctgactaaacaggcgaccaagaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctctgtggtcatagcacttgtgtagacacacctgctgactaaacaggcgaccaagaagta 379
Query: 61 cacttacaatcattcatctttatctgcaagccccatttctaccaaggacatgtgaactgg 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cacttac-atcattcatctttatctgcaagccccatttctaccaaggacatgtgaactgg 320
Query: 121 gtattgttcatcttcatataatgtcactatttgttctggtgcctgagcctaaaattgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gtattgttcatcttcatataatgtcactatttgttctggtgcctgagcctaaaattgaaa 260
Query: 181 gatacagttatcagggaaacaataatgtgtctgtgtacacatctataatgttgtggtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gatacagttatcagggaaacaataatgtgtctgtgtacacatctataatgttgtggtaac 200
Query: 241 atacctataatcttaccactcaggaggcagaagcagaaagttcacaaaaaaccccaaccc 300
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 199 atacctataatcttaccactcaggagccagaagcagaaagttcacaaaaaacaccaaccc 140
Query: 301 cacaaacaaaacacagtgctgtctttggtgccctctgtctcctccacctggctgctctcc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 139 cacaaacaaaacacagtgctgtctttggtgccctctgtctcctccacctggctgatctcc 80
Query: 361 ctgggaggaaggcacaagactaattcatactctaccttcagagggcaaagctaatggatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79 ctgggaggaaggcacaagactaattcatactctaccttcagagggcaaagctaatggatt 20
Query: 421 cttgctaaatcctattcct 439
|||||||||||||||||||
Sbjct: 19 cttgctaaatcctattcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 858
Length adjustment: 10
Effective length of query: 449
Effective length of database: 848
Effective search space: 380752
Effective search space used: 380752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_h13.g1 MSMg01no415_h13.g1 CHROMAT_FILE:
MSMg01no415_h13.g1 PHD_FILE: MSMg01no415_h13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:52 2005
(239 letters)
>mm_chr14_56934863_56935501
Length = 639
Score = 447 bits (231), Expect = e-130
Identities = 237/239 (99%)
Strand = Plus / Plus
Query: 1 ttcatggcttcatgcatacaacacgggaactctatcactggttcatcctcagtgtgactg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ttcatggcttcatgcatacaacacgggaactctatcactggtccatcctcagtgtgactg 260
Query: 61 aggtatgcactaggcacagaggatgaggcatccatccatcgtcttcctgtgaggcccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtatgcactaggcacagaggatgaggcatccatccatcgtcttcctgtgaggcccctt 320
Query: 121 aacctctcattccaataaagtgtgaactgggaaggttccagaacctccactactattata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 aacctctcattccaataaagtgtgaactgggaaggttccagaacctccactacaattata 380
Query: 181 ggaaccactgtgagttagtgggttatagctcttctaagaatttcctgtagttatctcaa 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaccactgtgagttagtgggttatagctcttctaagaatttcctgtagttatctcaa 439
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
