Query= MSMg01no416_e12.b1 MSMg01no416_e12.b1 CHROMAT_FILE:
MSMg01no416_e12.b1 PHD_FILE: MSMg01no416_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:52 2005
(528 letters)
>mm_chr14_76638038_76638965
Length = 928
Score = 959 bits (496), Expect = 0.0
Identities = 517/524 (98%)
Strand = Plus / Minus
Query: 5 gaattccctggctaatctcagccatgtaatttcagggctggcatccttctttgataagat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 728 gaattccctggctaatctcagccatgtaatttcagggctggcatccttctttggtaagat 669
Query: 65 gttggcaatctaaaaagcctcaaagctggaaggcatttggtcctcagaacatgtcgtaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gttggcaatctaaaaagcctcaaagctggaaggcatttggtcctcagaacatgtcgtaga 609
Query: 125 gtctcatttttctagtgatccatgaaccccacaccaggcttaatttcccaccatctgcct 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 608 gtctcatttttctagtgatccatgaaccccacaccaggtttaatttcccaccatctgcct 549
Query: 185 taaccctgtcatagacgtggcctccgggttaagatgtggagtccaaactggcagcctctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 taaccctgtcatagacgtggcctccgggttaagatgtggagtccaaactggcagcctctc 489
Query: 245 caagtcccctgtctatcaagggtccctcgggattccaggcatttctgcctcccctgagct 304
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cgagtcccctgtctatcaagggtccctcgggattccaggcatttctgcctcccctgagct 429
Query: 305 tgtcatggttcccaagggaggagaatcccccaactcttggaccaaagcctttctgctggc 364
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 428 tgtcatgaaccccaagggaggagaatcctccaactcttggaccaaagcctttctgctggc 369
Query: 365 agagaatgacagccgcttcctgtgtccccaacctcaggaggagcctgatatcagctcacg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agagaatgacagccgcttcctgtgtccccaacctcaggaggagcctgatatcagctcacg 309
Query: 425 agcttccatccctcagtcccattcatcaccatggcttcaacaatgacttctgggtcacca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 agcttccatccctcagtcccattcatcaccatggcttcaacaatgacttctgggtcacca 249
Query: 485 ttcccgtggaatcagaatatgcagatggaggagaaagcaaagaa 528
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttcccgtggaatcagaatatgcagatggaggagaaagcaaagaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no416_e12.g1 MSMg01no416_e12.g1 CHROMAT_FILE:
MSMg01no416_e12.g1 PHD_FILE: MSMg01no416_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:52 2005
(181 letters)
>mm_chr14_76463733_76464317
Length = 585
Score = 323 bits (167), Expect = 4e-93
Identities = 180/185 (97%), Gaps = 4/185 (2%)
Strand = Plus / Plus
Query: 1 aacagggtaagccatattttttaaggaagggatacaatcacccaaatgcataatgtggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagggtaagccatattttttaaggaagggatacaatcacccaaatgcataatgtggga 260
Query: 61 aatattaaaggataaatgattcagtttttt--actaaataaatagtattgagtaataagg 118
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aatattaaaggataaatgattcagttttttttactaaataaatagtattgagtaataagg 320
Query: 119 agaatgattgagactctatctttttaa-gattttaaagtttaaccttctaggat-ctgtt 176
||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||
Sbjct: 321 agaatgattgagactctatctttttaaagattttaaagtttaaacttctaggattctgtt 380
Query: 177 gataa 181
|||||
Sbjct: 381 gataa 385
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 181
Length of database: 585
Length adjustment: 8
Effective length of query: 173
Effective length of database: 577
Effective search space: 99821
Effective search space used: 99821
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
