TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTCAATGATTTCCAAAAAAATAAATATGTATGCTTGTTGTTACAGT
TTCATATTATATGAAAAACCTGAAAGAAAATAAAAATGTACTTTGTTTCA
CCAGGAGTATCTGAGTAACTATTTGTTCAAGAAGAAAATGTAGACTTGGG
CAACCCAGTTGTAAATCTACAAATCAACTCTCTCACCTTAGGCCAAAGTA
GCTTGCATTAACCTTAAATAAAGAGCTACAGGCAACAAATATAGGCAAAG
GCACACTGATAGTTTACCCAACTATAAAGAGTCATCTCTGGTAACATACA
TTCAATAAACATTAAACAGAATGAAATAATTATATTTGAGAATATATATT
TTATGCACATATAATCATATATGCAGCCAAAATTAATGAAAAATAGGTCA
AGAACTTGAGAATAAGCAGCTGTATGGACAGATTTCAAGAGTGAAAAAAA
AACACAAAGGCAATGAATAATTTTCTTATTATTTTATAAATAAAAGCAAT
GAATATAACTTCCCCATCTTTCCATTATTTAGGGCTGAACATTCCAAATG
TTATATATATTGCTTTGCATTTCTGTGTCTATCTGAAGTCATTTGCATGC
TACATCATGAGTGGTGTACATTGAACATGACAACATTTTCAGGATTGTCT
TCACTCTACCATTTTGGTCTCAGGAAATAAACTCAGGGACTCCGGATTTG
TGACAAGAAGACCATATT

CATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCAACTGAGGAAATTCGAATGGACAAGAA
GCACCTAAAGACATGTTCAACAGTCTTAGTTATCAGGGAATTGGAAATCA
AAACAATCCTGAGATTCCACCTCACCCCAGTCAGAATGGCTAAGATCAAA
AATTCAGGGGACAGCAGATGCTGATGAGGATGTGGAGAAAGAGGAACACT
CCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAG
TCTGGCAGTTCCTCAGAAAATTGGACATAGTAATACCAGAGGATCCTGCA
ATACCTCTCCTGGGCATATATCCAGAAGGTGTCTCAACCGGTGAGAAGGA
CACATGCTCCACTATGTACATAGCAGCCTTATTTATAATAGCCAGAAGCT
AGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGG
TACATTTACAGAATGGAGTACTACACAGCTATTANNAACAAGGAATTCAT
GAAATTCTTAGACAAATGAATTTATCTGGAGGATATCATCCTGAGTGAGT
ATCCCAATTCCAAAAGACACACATGATATGCACTCCCTGATAAGTGGGTA
TTAGCCCCCAAGCTTATAATATCCACAAAACATTTCCCAAAACATGGAAT
TTTTAAGAAAGAGAACAAAAGGGGGGAGTTTGGTTTTTTTTTCAAGGGGA
ACAAAACCCCCGGAAGGGGTTACTAAAAAAAN

Query= MSMg01no417_k23.b1 MSMg01no417_k23.b1 CHROMAT_FILE:
MSMg01no417_k23.b1 PHD_FILE: MSMg01no417_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:38 2005
         (620 letters)



>mm_chr14_108531042_108532060
          Length = 1019

 Score = 1152 bits (596), Expect = 0.0
 Identities = 614/620 (99%), Gaps = 1/620 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   taaatatgtatgcttgttgttacagtttcatattatatgaaaaacctgaaagaaaataaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taaatatgtatgcttgttgttacagtttcatattatatgaaaaacctgaaagaaaataaa 260

                                                                       
Query: 61  aatgtactttgtttcaccaggagtatctgagtaactatttgttcaagaagaaaatgtaga 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 aatgtactttgtttcaccaggagtatctgagcaactatttgttcaagaagaaaatgtaga 320

                                                                       
Query: 121 cttgggcaacccagttgtaaatctacaaatcaactctctcaccttaggccaaagtagctt 180
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 cttgggcaacccagttgtaaatctacaagtcaactctctcaccttaggccaaagtagctt 380

                                                                       
Query: 181 gcattaaccttaaataaagagctacaggcaacaaatataggcaaaggcacactgatagtt 240
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcattaaccttacataaagagctacaggcaacaaatataggcaaaggcacactgatagtt 440

                                                                       
Query: 241 tacccaactataaagagtcatctctggtaacatacattcaataaacattaaacagaatga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tacccaactataaagagtcatctctggtaacatacattcaataaacattaaacagaatga 500

                                                                       
Query: 301 aataattatatttgagaatatatattttatgcacatataatcatatatgcagccaaaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataattatatttgagaatatatattttatgcacatataatcatatatgcagccaaaatt 560

                                                                       
Query: 361 aatgaaaaataggtcaagaacttgagaataagcagctgtatggacagatttcaagagtga 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgaaaaataggtcaagaacttgagaataagcagctgtatggacagatttcaagagtga 620

                                                                       
Query: 421 aaaaaaaacacaaaggcaatgaataattttcttattattttataaataaaagcaatgaat 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaaaa-cacaaaggcaatgaataattttcttattattttataaataaaagcaatgaat 679

                                                                       
Query: 481 ataacttccccatctttccattatttagggctgaacattccaaatgttatatatattgct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ataacttccccatctttccattatttagggctgaacattccaaatgttatatatattgct 739

                                                                       
Query: 541 ttgcatttctgtgtctatctgaagtcatttgcatgctacatcatgagtggtgtacattga 600
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttgcatttctgtgtctatctgaggtcatttgcatgctacatcatgagtggtgtacattga 799

                               
Query: 601 acatgacaacattttcagga 620
           |||||||||| |||||||||
Sbjct: 800 acatgacaacgttttcagga 819


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1019
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1009
Effective search space:   615490
Effective search space used:   615490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)