Query= MSMg01no417_n16.b1 MSMg01no417_n16.b1 CHROMAT_FILE:
MSMg01no417_n16.b1 PHD_FILE: MSMg01no417_n16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:52 2005
(418 letters)
>mm_chr14_63037085_63037902
Length = 818
Score = 667 bits (345), Expect = 0.0
Identities = 403/425 (94%), Gaps = 8/425 (1%)
Strand = Plus / Minus
Query: 1 agcctggctttattgaccccgaggaccaggctattctaggttgtgatgggctgcactttg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 708 agcctggctttattgaccccgaggaccaggctattctaggttatgatgggctgcactttg 649
Query: 61 tgctgtaagatctgtcaccacagcacagacatctctctatccaagatatatgtccaatgt 120
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 648 tgctgtaagatctgtcaccacagcacagacatctctctatccaaaatagatgtccaatgt 589
Query: 121 agctagtagaaccttacctcttagttgtggcaatcaaaaatgtattcaggcattgtcaat 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 agctagtagaacgttacctcttagttgtggcaatcaaaaatgtattcaggcattgtcaat 529
Query: 181 tgtccccagagt--agagatggtggtggtggtgggg-tacccacttctagctgagaatcg 237
|||||||||||| ||||||||||| || || |||| |||||||||||||||||||||
Sbjct: 528 tgtccccagagtagagagatggtggagg-gggggggaaacccacttctagctgagaatca 470
Query: 238 caaaatcattgttatcttaatgcagactttctaggatgtgcttgagtctgcaaaatgttc 297
|||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 469 caaaatcaaggttaacttaatgcagactttctaggatgtgcttgagtctgtaaaatgttc 410
Query: 298 atgtatagaaatagcaaagctaggaat----ggcagtttatacctataatgcacttggga 353
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 409 atgtatagaaatagcaaagctaggaatggcaggcagtttatacctataatgcacttggga 350
Query: 354 tgctgaggcaggaggattgctattactttgctattactttatcctaacccagttttggat 413
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 349 tgctgaggcaggaggattgctattactttgctattactttatccaaatccagttttggat 290
Query: 414 aaaga 418
|||||
Sbjct: 289 aaaga 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_n16.g1 MSMg01no417_n16.g1 CHROMAT_FILE:
MSMg01no417_n16.g1 PHD_FILE: MSMg01no417_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:52 2005
(402 letters)
>mm_chr14_62871120_62871921
Length = 802
Score = 696 bits (360), Expect = 0.0
Identities = 384/402 (95%), Gaps = 16/402 (3%)
Strand = Plus / Plus
Query: 1 acagtgatccaagaagtatagatccttccgttcctccagtggtggctactcaacttccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtgatccaagaagtatagatccttccgttcctccagtggtggctactcaacttccaa 260
Query: 61 ctgatttacagttactttttaaatcttgaattccaagatttaatgaagttgccattgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatttacagttactttttaaatcttgaattccaagatttaatgaagttgccattgcaa 320
Query: 121 cttcattttcaactagtatgttaataattgcacctccaagccaagcttgtagtagttagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttcattttcaactagtatgttaataattgcacctccaagccaagcttgtagtagttagt 380
Query: 181 gtcttgactgtcagtcaatagacagacaagtaaggcctagtgtgaccagagcccctgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcttgactgtcagtcaatagacagacaagtaaggcctagtgtgaccagagcccctgggg 440
Query: 241 acccactgggaggggcagtcgggattgggaaccagcgagggtttcccagagaggttcagg 300
|||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 441 acccactgtgaggggcagtcgggattgggaaccagcgagggtttcccggagaggttcagg 500
Query: 301 gcaaggtcagcaaagaagattgtatacacacacacacacacacacacacacacacacaca 360
|||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 501 gcaaggtcagcaaagaagattgta----------------cacacacacacacacacaca 544
Query: 361 cacacacacacacacacacacacactgtaatctcaacactca 402
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cacacacacacacacacacacacactgtaatctcaacactca 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 26
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 17
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
