Query= MSMg01no418_c06.b1 MSMg01no418_c06.b1 CHROMAT_FILE:
MSMg01no418_c06.b1 PHD_FILE: MSMg01no418_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:15 2005
(524 letters)
>mm_chr14_32263642_32264564
Length = 923
Score = 891 bits (461), Expect = 0.0
Identities = 508/527 (96%), Gaps = 8/527 (1%)
Strand = Plus / Plus
Query: 1 ggatagcattattttataggacacttgttagaggttgacgtttgactcaggtcacagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggatagcattattttataggacacttgttagaggttgacgtttgactcaggtcacagaac 260
Query: 61 tggagtaagcgaaccaggatggcagtctgggaagcctgcttccacatgcaggacaccaca 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tggagtaagcgaaccaggatggcagtctgggcagcctgcttccacatgcaggacaccaca 320
Query: 121 gcgagcacaggagtgtggtctgacacacgctagcttagtctggacgttagtgtgtctgga 180
| ||||||||||| |||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 321 gtgagcacaggagcgtggtctgacacacgctagcttagtctggatgttagcgtgtctgga 380
Query: 181 aaaaagggaaagtggcttatagactatcttcccgtttgaaggctctgccaggaatccctg 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaagggaaggtggcttatagactatcttcccgtttgaaggctctgccaggaatccctg 440
Query: 241 tggtgtc---ttttttaagacttctgtactctatagagtgttttctaagataatgcatat 297
||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtgtcaggta----aagacttctgtactctatagagtgttttctaagataatgcatat 496
Query: 298 atccattttgctttttaagtccaggttggcctcaaactcctgatcctcctggctgtctta 357
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atccattttgttttttaagtccaggttggcctcaaactcctgatcctcctggctgtctta 556
Query: 358 agcgctgggatcttgggcatatgccaccatgccaaacacaggattatgaagaaaatcaat 417
|| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct: 557 agtgctgggatcttgggcatgtgccaccatgccaaacacaggattatgaagaaaatca-t 615
Query: 418 tatagtaagatgcatctttgaaatgttgcccaaagttaggatatagcaacatatacatcc 477
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 616 tatagtaagatgcatctttgaaatgttgcccagagttaggatatagcaacatatacatcc 675
Query: 478 accctatgaggtcattacactctataagggactctggagatgtagag 524
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 accctatgaggtcattacactctataagggactctggagatgtagag 722
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 923
Length adjustment: 10
Effective length of query: 514
Effective length of database: 913
Effective search space: 469282
Effective search space used: 469282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_c06.g1 MSMg01no418_c06.g1 CHROMAT_FILE:
MSMg01no418_c06.g1 PHD_FILE: MSMg01no418_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:16 2005
(376 letters)
>mm_chr14_32442516_32443291
Length = 776
Score = 687 bits (355), Expect = 0.0
Identities = 370/375 (98%)
Strand = Plus / Minus
Query: 1 ctcagttgaagttattcatccaggaacttcagatatatatctgcattaatgtatgggata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctcagttgaagttattcatccaggaacttcagatatatatctgcattaatgtatgggata 412
Query: 61 ttgacaggcatcttcatgtaagcctagaggtaaggcagacagctgttgagaaacccagca 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttgacaggcatcttcatgcaagcctagaggtaaggcagacagctgttgagaaacccagca 352
Query: 121 gagaaggcatctgtctagctgatcctagaaacgatgttctgaagtgtgtcgagggtttat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 351 gagaaggcatctgtctagctgatcctagaaacgatgttctgaagtgtgtcgagggtttgt 292
Query: 181 cctctacatgcatttcttaaatacactccgattgaaaagaggtctaaaaaccgcacactc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 291 cctctacatgcatttcttaaatacactccgattgaaaagaggtctaaaaaccacacactc 232
Query: 241 ggtatcattcgtcttgataaagatgctactggccaggcggtggtgccgcacgcctttaat 300
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 231 ggtatcattcgtcttgataaagatgctactggccaggcggtggtggcgcacacctttaat 172
Query: 301 cccagcactcgggaggcagaggcaggcagatttctgagtttgaggccagcctggtctaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cccagcactcgggaggcagaggcaggcagatttctgagtttgaggccagcctggtctaca 112
Query: 361 aagtgagttccagga 375
|||||||||||||||
Sbjct: 111 aagtgagttccagga 97
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
