Query= MSMg01no419_l06.b1 MSMg01no419_l06.b1 CHROMAT_FILE:
MSMg01no419_l06.b1 PHD_FILE: MSMg01no419_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:19 2005
(477 letters)
>mm_chr14_69432365_69433241
Length = 877
Score = 777 bits (402), Expect = 0.0
Identities = 453/482 (93%), Gaps = 23/482 (4%)
Strand = Plus / Minus
Query: 1 aactatgagacaaatcccaattgtaggagtttgccatttcatgactttttactcctttga 60
||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 727 aactatgagacaaatcccaattgtaggagtttgccatttcatgacgtttt---------- 678
Query: 61 gtaactcacgaagctcattgtgagatcagttgtccttcaagcctagaagttctctgtctg 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ---actcatgaagctcattgtgagatcagttgtccttcaagcctagaagttctctgtctg 621
Query: 121 tcataccttgcaagactaattatcattgacatgatgaaacagaagcagtggttctcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tcataccttgcaagactaattatcattgacatgatgaaacagaagcagtggttctcatgg 561
Query: 181 atgatggcacagcctttcctagacttttgactctgtgggcagggatgtaggagagccaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atgatggcacagcctttcctagacttttgactctgtgggcagggatgtaggagagccaaa 501
Query: 241 gg--ttttg---ttttttcacaatagttaacatcctctctctggccacttagtaaccgtg 295
| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agcc---tgcaa--ttttcacaatagttaacatcctctctctggccacttagtaaccgtg 446
Query: 296 aagcaaaaggttaggttttttttacattatctgtgttgcaaatttgtcatcttaaaaaaa 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagcaaaaggttaggttttttttacattatctgtgttgcaaatttgtcatcttaaaaaaa 386
Query: 356 ttcacaatgatcactgtggtatggagtagttagtataaaccacccatgcgtgggttctga 415
|||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||
Sbjct: 385 ttcacaatgatcactgtggtatggagtatttagtataaatcacccatgtgtgggttctga 326
Query: 416 actaagtgggcttttctgtactctcactgtcacatatgcagcacatgttgtcatgatcat 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actaagtgggcttttctgtactctcactgtcacatatgcagcacatgttgtcatgatcat 266
Query: 476 ta 477
||
Sbjct: 265 ta 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_l06.g1 MSMg01no419_l06.g1 CHROMAT_FILE:
MSMg01no419_l06.g1 PHD_FILE: MSMg01no419_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:19 2005
(421 letters)
>mm_chr14_69258552_69259371
Length = 820
Score = 737 bits (381), Expect = 0.0
Identities = 411/421 (97%), Gaps = 1/421 (0%)
Strand = Plus / Plus
Query: 1 caaagaaaaaaagcagaaaaccgtttaaccagggcttctagtatccagtgaccaaccaga 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaagaaaaaaagcagaaaacagtttaaccagggcttctagtatccagtgaccaaccaga 260
Query: 61 agagggtgaccagcaaggcgcttcagaaagccaacgcagcagcatattgggaaagcatga 120
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 261 agagggtgaccagcaaggcgcttcagaaagccaa-gcagcagcacattgggaaagcatga 319
Query: 121 ccacttctacatggcacccaaagactcgagatggaagaccagaggctggtgccaaccaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccacttctacatggcacccaaagactcgagatggaagaccagaggctggtgccaaccaga 379
Query: 181 accagaggtatattaagagaaacatgtagccagaataagtttgtctgggttcctaaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 380 accagaggtatattaagagaaacatgtagccagaataagtttgtctgggttcctagataa 439
Query: 241 ggctggtgaaatttaattccatggcaaaaagaaacaaccttgggttttcctgtttgctta 300
|||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 ggctggcaaaatttaattccatggcaaagagaaacaaccttgggttttcctgtttgctta 499
Query: 301 tttgtttgtttatttggtttagcccttgtttgggtttttttgcttgctttttagcttaga 360
|||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct: 500 tttgtttgtttatttggtttagcccttgtttggggttttttgtttgttttttagcttaga 559
Query: 361 tggttgaatgattttacttagaaccagtctgcctggtgcttgcagattctgagaacactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggttgaatgattttacttagaaccagtctgcctggtgcttgcagattctgagaacactt 619
Query: 421 g 421
|
Sbjct: 620 g 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
