Query= MSMg01no422_f09.b1 MSMg01no422_f09.b1 CHROMAT_FILE:
MSMg01no422_f09.b1 PHD_FILE: MSMg01no422_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:45 2005
(277 letters)
>mm_chr14_26048527_26049203
Length = 677
Score = 468 bits (242), Expect = e-136
Identities = 254/258 (98%)
Strand = Plus / Minus
Query: 5 gaattccctgccttatcgtgagggaagtggtgaagtcatgcttccactgtggacggaact 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaattccctgccttaaagtgagggaagtggtgaagtcatgcttccactgtggacggaact 379
Query: 65 gccgatcctagcatcctttgtaggactctgtaacacaaggtctgtacatcctttgaggaa 124
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gtcgatcctagcatcctttgtaggactctgtaacacaaggtctgtacatcctttgaggaa 319
Query: 125 gggcacagacgtatatgtatcagcgggtcagttacatgtcacctgggaaaacgagtagca 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gggcacagacatatatgtatcagcgggtcagttacatgtcacctgggaaaacgagtagca 259
Query: 185 ggcagtgttgtagaacactgtcaaggctcttcttggagatggcaggacgctaaggcagca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggcagtgttgtagaacactgtcaaggctcttcttggagatggcaggacgctaaggcagca 199
Query: 245 gcagcagcagcagcagca 262
||||||||||||||||||
Sbjct: 198 gcagcagcagcagcagca 181
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no422_f09.g1 MSMg01no422_f09.g1 CHROMAT_FILE:
MSMg01no422_f09.g1 PHD_FILE: MSMg01no422_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:46 2005
(250 letters)
>mm_chr14_25863132_25863781
Length = 650
Score = 429 bits (222), Expect = e-125
Identities = 238/248 (95%), Gaps = 8/248 (3%)
Strand = Plus / Plus
Query: 1 catatgaagttttaattcatactcactccgattcaggagatagtttctccatcttacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatgaagttttaattcatactcactccgattcaggagatagtttctccatcttacaga 260
Query: 61 caaaaagtctgatcctcacaagagttacagaagtgattgaagactgccaacctataaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaaagtctgatcctcacaagagttacagaagtgattgaagactgccaacctataaata 320
Query: 121 agtttaaaaagcaaagtatccaacagttggtcccttctagagcctcatacagtatgatga 180
|||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttaaaaaagcaaa--------cagttggtcccttctagagcctcatacagtatgatga 372
Query: 181 atttgcctcttctgaaaggtcatctagaggtcatttggcacactctcctttgcagaaatg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agttgcctcttctgaaaggtcatctagaggtcatttggcacactctcctttgcagaaatg 432
Query: 241 acaagtgt 248
||||||||
Sbjct: 433 acaagtgt 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
