Query= MSMg01no422_p12.b1 MSMg01no422_p12.b1 CHROMAT_FILE:
MSMg01no422_p12.b1 PHD_FILE: MSMg01no422_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:32 2005
(568 letters)
>mm_chr14_9734920_9735887
Length = 968
Score = 1029 bits (532), Expect = 0.0
Identities = 541/544 (99%)
Strand = Plus / Plus
Query: 24 gaaagatgagagaagcagaaaagtcacagagttttgtttctaccaacaaaactcatgcag 83
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 gaaagatgagagaagcagaaaagtcacagagttttgtttctaccaacaaaactcatgcag 283
Query: 84 aaaagaaaaaaaaggaaacaaagaaattttggaggcaccaggcattttgctgttgttagg 143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 aaaagaaaaaaaaggaaacaaagaaattttggaggcaccaggcattttgctgttgttagg 343
Query: 144 gaaaagtcaccgaggctcttagagtgaataaagctacacccataaagctataccctctga 203
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 gaaaagtcaccgaggctctcagagtgaataaagctacacccataaagctataccctctga 403
Query: 204 tcatttctattctatcagaatgggtttttcaaatgcgacctgtgatctgatagtagattt 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tcatttctattctatcagaatgggtttttcaaatgcgacctgtgatctgatagtagattt 463
Query: 264 tttttatttatgcaaaggatagagtcaatgatattactaacttacctcaaaaagataagt 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tttttatttatgcaaaggatagagtcaatgatattactaacttacctcaaaaagataagt 523
Query: 324 aaaacatccacagaaaagagcaggcaaaagcccttagatagcaccatggtgccattggag 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 aaaacatccacagaaaagagcaggcaaaagcccttagatagcaccatggtgccattggag 583
Query: 384 tgtgtttgttccaaagagttaaaagggcattgcaagttgcatttgcagcttagagcagct 443
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tctgtttgttccaaagagttaaaagggcattgcaagttgcatttgcagcttagagcagct 643
Query: 444 cagagagctaggccagcttgggatagatgccgcagtgtttcacaaatccaagcagaaagg 503
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 644 cagagagctaggccagcttgggatagatgccgcagtgtttcacaaatccaagctgaaagg 703
Query: 504 cagtgccgcccaactttgattttgctttgctttttctcccctaaggagaagaatgatctt 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cagtgccgcccaactttgattttgctttgctttttctcccctaaggagaagaatgatctt 763
Query: 564 caag 567
||||
Sbjct: 764 caag 767
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 968
Length adjustment: 10
Effective length of query: 558
Effective length of database: 958
Effective search space: 534564
Effective search space used: 534564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_p12.g1 MSMg01no422_p12.g1 CHROMAT_FILE:
MSMg01no422_p12.g1 PHD_FILE: MSMg01no422_p12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:32 2005
(217 letters)
>mm_chr14_9892393_9893009
Length = 617
Score = 412 bits (213), Expect = e-120
Identities = 216/217 (99%)
Strand = Plus / Minus
Query: 1 taggagagcacacagcatattagctttagccctgacgttgataaatcgcctgggctctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 taggagagcacacagcatattagctttagccctgacgttgataaatcgcctgggctctgc 358
Query: 61 ggaatgcgaaaggatattgtagggagaaatgctatattgtctgtgatagcactttgaggt 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 357 ggaatgcgaaaggatattgtagggagaaatgctatactgtctgtgatagcactttgaggt 298
Query: 121 ctccagagaaaggcatctatttaaatgtggcaaaagccaaggattgaagagaatcccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ctccagagaaaggcatctatttaaatgtggcaaaagccaaggattgaagagaatcccagg 238
Query: 181 atctcgaggctcttgatgcagctccaccacgtggcca 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 atctcgaggctcttgatgcagctccaccacgtggcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 617
Length adjustment: 9
Effective length of query: 208
Effective length of database: 608
Effective search space: 126464
Effective search space used: 126464
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
