Query= MSMg01no423_d08.b1 MSMg01no423_d08.b1 CHROMAT_FILE:
MSMg01no423_d08.b1 PHD_FILE: MSMg01no423_d08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:50 2005
(495 letters)
>mm_chr14_70331176_70332070
Length = 895
Score = 683 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Minus
Query: 1 gggctgtcatcggaccctttagaaactgaggatataaaattctatggcctaagaaggctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gggctgtcatcggaccctttagaaactgaggatataaaattctatggcctaagaaggctg 298
Query: 61 tgcctgccaatattccatcatgaatgagtggggctctcaaggacccaccccttcctaagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgcctgccaatattccatcatgaatgagtggggctctcaaggacccaccccttcctaagg 238
Query: 121 ggctgctggccatttccagctgctggggaggcaatgctgtagccattgaaaagttgccca 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggctgctggccatttctagctgctggggaggcaatgctgtagccattgaaaagttgccca 178
Query: 181 tgctccagtaaatatccttcaaccacgctgattcgagcaatcataaattcagtgggtccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tgctccagtaaatatccttcaaccacgctgattcgagcaatcataaattcagtgggtccc 118
Query: 241 tcacaaataaaggcatgggaagagggacttcctagaaagaaggattttgtccaagaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tcacaaataaaggcatgggaagagggacttcctagaaagaaggattttgtccaagaccag 58
Query: 301 gagatgagagagggcgtgggggtgaaatggctaaaattcatcatgggtatgtgtaga 357
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57 gagatgagagagggcgtgggggtgaaatggctaaaattcatcatgggtatgtgtaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_d08.g1 MSMg01no423_d08.g1 CHROMAT_FILE:
MSMg01no423_d08.g1 PHD_FILE: MSMg01no423_d08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:50 2005
(555 letters)
>mm_chr14_70327288_70328241
Length = 954
Score = 1027 bits (531), Expect = 0.0
Identities = 549/555 (98%), Gaps = 1/555 (0%)
Strand = Plus / Plus
Query: 1 accatgtcccatacataccaaaataaaagcaattacagatttaaacgaagccatgatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatgtcccatacataccaaaataaaagcaattacagatttaaacgaagccatgatttt 260
Query: 61 ttttagtgcagaaaatacttgttttagcccaagatggggttcagggagagtgacctctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttagtgcagaaaatacttgttttagcccaagatggggttcagggagagtgacctctaa 320
Query: 121 ctcctctgtaatgaaaacaccttgcagccctgaaggcttccggatggtaattgctctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctctgtaatgaaaacaccttgcagccctgaaggcttccggatggtaattgctctggg 380
Query: 181 cagagagatagagatggaggtgtgctaatggtcttttgtttccttttggaagcaagcgga 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 cagagagatagagatggaggtgtgctaatgatcttttgtttccttttggaagcaagcgga 440
Query: 241 gccgccccacatcctccgactgcacggggatgaggtagaaacgaacccctccactcgcat 300
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 441 gctgccccacatcctccgactgcacggggatgaggtagagacgaacccctccactcgcat 500
Query: 301 ctcagctgctcactttcatcttccccatgggtctcttctcttcaggtagtctctcaggac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcagctgctcactttcatcttccccatgggtctcttctcttcaggtagtctctcaggac 560
Query: 361 ctggagaatttacaaccaggcccaatggatgtatttaaacatgtgagcaagcacgagaga 420
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 ctggcgaatttacaaccaggcccaatggatgtatttaaacatgtgagcaagcacaagaga 620
Query: 421 gaaacagacacagccttctctctctttctcattttttccccctttctattcagtgaggac 480
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 621 gaaacagacacagccttctctctctttctcattttttcccc-tttctattcagtgaggac 679
Query: 481 tttacatagccaggaactatataatccatattttcttcacagtcacaaagactgctggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttacatagccaggaactatataatccatattttcttcacagtcacaaagactgctggaa 739
Query: 541 ctgagttcctgttgg 555
|||||||||||||||
Sbjct: 740 ctgagttcctgttgg 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
