Query= MSMg01no424_f20.b1 MSMg01no424_f20.b1 CHROMAT_FILE:
MSMg01no424_f20.b1 PHD_FILE: MSMg01no424_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:18 2005
(154 letters)
>mm_chr14_102905312_102905865
Length = 554
Score = 246 bits (127), Expect = 6e-70
Identities = 133/135 (98%)
Strand = Plus / Plus
Query: 1 tgtactatatttaaatgtaaagtcggagagtgtgatgctgacataaactttcacatattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtactatatttaaatgtaaagtcggagagtgtgatgctgacataaactttcacatattt 260
Query: 61 aaggaagttaagttcccatagaaggatttgctttttcaaaatgattggtgtttgtgtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aaggaagttaagttcccatagaaggatttgctttttcaaaatgattggtgtgtgtgtgtg 320
Query: 121 tgtgtgtgtgtgtgt 135
|||||| ||||||||
Sbjct: 321 tgtgtgcgtgtgtgt 335
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 554
Length adjustment: 8
Effective length of query: 146
Effective length of database: 546
Effective search space: 79716
Effective search space used: 79716
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no424_f20.g1 MSMg01no424_f20.g1 CHROMAT_FILE:
MSMg01no424_f20.g1 PHD_FILE: MSMg01no424_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:18 2005
(516 letters)
>mm_chr14_103068216_103069131
Length = 916
Score = 644 bits (333), Expect = 0.0
Identities = 385/403 (95%), Gaps = 2/403 (0%)
Strand = Plus / Minus
Query: 116 gagggctgcctccgtgggcatggtgggaggtttagactgggccctaggttgctcttcaat 175
|||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 916 gagggctgcctccgtgagcatggtgggaggtttggactgggccctagtttgctcttcaat 857
Query: 176 agctgtaccagttatgaaaatgatgaccactaattgccaatagtttctcaaggacagg-- 233
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 856 agctgtaccagttatgaaaatgatgaccactaattgccaattgtctctcaaggacaggga 797
Query: 234 gggctagggacttgtgaacccctgtctgtcaatgatacaatgttggcagacccagacttg 293
||| | |||||| ||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 796 ggggtggggactcatgagcccctgtctgtcaatgatacaatgttggcagacccagtcttg 737
Query: 294 tggaggccttgtgcaggtaaaatgcatcactttagtctctttgggaagctctgctgggat 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tggaggccttgtgcaggtaaaatgcatcactttagtctctttgggaagctctgctgggat 677
Query: 354 cttttatgcatttttgtatagatttcccattgatctctttgtttttctagctcatttttt 413
|||||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||
Sbjct: 676 cttttatgcatttttgtacagatttcccattgatctctttgcttttgtagctcatttgtt 617
Query: 414 tttccactcttacatgatggggagtctctggggctgacttttctgtgatgcagactggtc 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tttccactcttacatgatggggagtctctggggctgacttttctgtgatgcagactggtc 557
Query: 474 ccctattccggggagacaggcacctttcacaggcccacttcat 516
||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 556 ccctactccggggagacaggcacctttcacaggcccacttcat 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
