Query= MSMg01no425_m20.b1 MSMg01no425_m20.b1 CHROMAT_FILE:
MSMg01no425_m20.b1 PHD_FILE: MSMg01no425_m20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:07 2005
(631 letters)
>mm_chr14_71608892_71609922
Length = 1031
Score = 1064 bits (550), Expect = 0.0
Identities = 607/626 (96%), Gaps = 2/626 (0%)
Strand = Plus / Minus
Query: 7 gaattccacacaccttatcccaccatctccagacttccactcttggcttagactgtcctc 66
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 831 gaattccacacaccttaacccaccatctccagacttccgctcttggcttagactgtcctc 772
Query: 67 ccatgacccaaggaagtagagagtgaaagggaagctaagctacagagcaatgtggattga 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 771 ccatgacccaaggaagtagagagtgaaagggaagctaagctacagagtaatgtacattga 712
Query: 127 atagtgcaca-cactaacccttgcttgtcttccatggatcctgttaagcatgagagacag 185
||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 711 ttagtgca-agcactaacccttgcttgtcttccatggatcctgttaagcatgagacacag 653
Query: 186 aaaggagaatgtgaccctgttctgctgtccggactcagtctagggaggcagagatagttt 245
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 652 aaaggagaatgtgaccctgttctgctgtcgggactcagtctagggaggcagagatagttt 593
Query: 246 agggaaaaaaatcatgttttctttgtagagccatcactgtggtccagagaagggatggag 305
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 592 agggggaaaaatcatgttttctttgtagaaccatcactgtggtccagagaagggatggag 533
Query: 306 gggcttagttggttttgtcctgttattgtgacttaactgttttgtacagaagaaggaagg 365
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 532 gggcttagttggttttgtcctgttattgtgacttaacttttttgtacagaagaaggaagg 473
Query: 366 gttttgtgtactgaaagggaaataattcagtgaggcagtagtgttggacagaggggatgg 425
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 472 gttttgtgtactgaaagggaaataatttggtgaggcagtagtgttggacagaggggatgg 413
Query: 426 agttgacaagcccccattcttcctctgatttcatggaccatggccctcctcctactgaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 agttgacaagcccccattcttcctctgatttcatggaccatggccctcctcctactgaaa 353
Query: 486 actagcctttctctagcctttctcccatgctcaacccccgtgagtggtgtggttcagcat 545
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 352 actagcctttctctagcctttctcccatcctcaacccccgtgagtggtgtggttcagcat 293
Query: 546 agttctgtgtgaactaattgttattttctggtatgtccagattttattaagtcttccggt 605
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atttctgtgtgaactaattgttattttctggtatgtccagattttattaagtcttccggt 233
Query: 606 cagtggaaatcggagtgagagtcgca 631
||||| ||||||||||||||||||||
Sbjct: 232 cagtgaaaatcggagtgagagtcgca 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_m20.g1 MSMg01no425_m20.g1 CHROMAT_FILE:
MSMg01no425_m20.g1 PHD_FILE: MSMg01no425_m20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:07 2005
(501 letters)
>mm_chr14_71463942_71464842
Length = 901
Score = 893 bits (462), Expect = 0.0
Identities = 489/502 (97%), Gaps = 8/502 (1%)
Strand = Plus / Plus
Query: 1 tctttgtttggttgtctaattcttcttttatgagatgtttgctgtgaccattgaggacga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttgtttggttgtctaattcttcttttatgagatgtttgctgtgaccattgaggacga 260
Query: 61 cccatttattgtcttcaaattccaattttgctcttttgtttctaactagctaaacatata 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 cccatttattgtcttcaaattccaattttgctcttttgtttctagctagctaaacatata 320
Query: 121 gtattgcttatgagcatgtgaatgtaactttaggcttctcctcttgccataccagatttg 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtattgcttatgagcatgtgaatataactttaggcttctcctcttgccataccagatttg 380
Query: 181 tgggcagtttaagggatctggggagagtttcccttctctactgactttcagggttgtccc 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 tgggcagtttaagggatctggggagagtttcccttctctgctgactttcagggttgtccc 440
Query: 241 tgtctcagtctgtaggagagagt-tgtttattttagtccagtggttcttaaccttcccaa 299
||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtctcagtctgtag-------tctgtttattttagtccagtggttcttaaccttcccaa 493
Query: 300 tgctgtgactctttaaaacagttcctcaaattgtagtgagccccattcacacaataattt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgctgtgactctttaaaacagttcctcaaattgtagtgagccccattcacacaataattt 553
Query: 360 tcattgctacttcataaccataattttgctactgttatgaataataacgtaaatattttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcattgctacttcataaccataattttgctactgttatgaataataacgtaaatattttt 613
Query: 420 ggagatagagatttgccaaaggggttgttgcccaaaggttgagaactgctgtgttagttc 479
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 614 ggagatagagatttgccaaaggggttgttgcccacaggttgagaactgctgtgttagtac 673
Query: 480 atggaactgagttatttgatcc 501
||||||||||||||||||||||
Sbjct: 674 atggaactgagttatttgatcc 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
