Query= MSMg01no428_k10.b1 MSMg01no428_k10.b1 CHROMAT_FILE:
MSMg01no428_k10.b1 PHD_FILE: MSMg01no428_k10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:53 2005
(265 letters)
>mm_chr14_113973074_113973738
Length = 665
Score = 466 bits (241), Expect = e-136
Identities = 256/261 (98%), Gaps = 2/261 (0%)
Strand = Plus / Minus
Query: 6 aattcaccat-taactaaattatttcctcaactcacatctctttgcacacattgctgtgg 64
|||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 465 aattcaccatgaaac-aaattatttcctcaactcacttctctttgcacacattgctgtgg 407
Query: 65 ccacagcctgcatattgaaatcaagaacctaaaaggtagaaatgagagctacagagttga 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 406 ccacagcctgcatattgaaatcaagaacctaaaaggtagaaatgagagatacagagttga 347
Query: 125 gatactatctttaaatgtctagttaagcatccaagacaatctcagagcccagatcacact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gatactatctttaaatgtctagttaagcatccaagacaatctcagagcccagatcacact 287
Query: 185 taagagccacgaaacttattgccagttcctgaaacccgttgtaaatctttatttgaattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 taagagccacgaaacttattgccagttcctgaaacccgttgtaaatctttatttgaattt 227
Query: 245 ttatggccggatatcataacg 265
|||||||||||||||||||||
Sbjct: 226 ttatggccggatatcataacg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 665
Length adjustment: 9
Effective length of query: 256
Effective length of database: 656
Effective search space: 167936
Effective search space used: 167936
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_k10.g1 MSMg01no428_k10.g1 CHROMAT_FILE:
MSMg01no428_k10.g1 PHD_FILE: MSMg01no428_k10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:53 2005
(399 letters)
>mm_chr14_113794531_113795329
Length = 799
Score = 721 bits (373), Expect = 0.0
Identities = 391/397 (98%)
Strand = Plus / Plus
Query: 1 atcacaagctgcaaataagacagggaaaatgcataccagctacaaaaatgccttgttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcacaagctgcaaataagacagggaaaatgcataccagctacaaaaatgccttgttaat 260
Query: 61 aaaagaggaatgatttagaggcaggagaaaataaagtacacagcacctgggccagatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaagaggaatgatttagaggcaggagaaaataaagtacacagcacctgggccagatcta 320
Query: 121 cagccgctcatctgtgggcagtggagctgggtcctaatgagccaagagagcgagcaggag 180
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 cagccgctcatctgtgggctgtggagctgggtcctaaagagccaagagagcgagcaggag 380
Query: 181 atcctggcgatcctctccttccggggagacagtgtgagtcttcacttcacctggttgctt 240
| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 accctggcgatcctctccttccggggagacagtgtgagtcttcacgtcacctggttgctt 440
Query: 241 tgttcccaaacttcacaatgtatgacgtttttctcagcttctcctatgattgctgttacc 300
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttcccaaacttcacactgtatgacgtttttctcagcttctcctatgattgctgttacc 500
Query: 301 attttaaaatgttactttccagagtggtacagttattcccaattttaagatagttgcttt 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 attttaaaatgttactttccagagtggcacagttattcccaattttaagatagttgcttt 560
Query: 361 taaaatatcagattataaatattctcaaacttgcacc 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaatatcagattataaatattctcaaacttgcacc 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
