Query= MSMg01no429_i19.b1 MSMg01no429_i19.b1 CHROMAT_FILE:
MSMg01no429_i19.b1 PHD_FILE: MSMg01no429_i19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
(567 letters)
>mm_chr14_78844981_78845947
Length = 967
Score = 1027 bits (531), Expect = 0.0
Identities = 558/567 (98%)
Strand = Plus / Minus
Query: 1 attctagcgagggatataactctttgtctgtgttgaccctagacaatgatcagtgaccag 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 attctagcaagggatataactctttgtctgtgttgaccctagacaatgatcagtgaccag 554
Query: 61 gaggtaaaatcttgagactagaggcttggctgctagcttagcagaaaccacagtcctgac 120
|||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 553 aaggtaaaatcttgagactagagacttggctgctggcttagcagaaaccacagtcctgac 494
Query: 121 atttttagccttttctttggaatcatctcaatcaagaaactattcttacgacagacaaat 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 493 atttttagccttttctttggaatcgtctcaatcaagaaactattcttacgacagacaaat 434
Query: 181 ttgacaaaataacctcaccagatcaaatgccagggcacatcagataattcctccatcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgacaaaataacctcaccagatcaaatgccagggcacatcagataattcctccatcact 374
Query: 241 gtgacccattttctgtggtccctctcatgactgaattcataattctttaaggaatcttca 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgacccgttttctgtggtccctctcatgactgaattcataattctttaaggaatcttca 314
Query: 301 aaattacatgataattgaaacaaattaccaggaaaacatatagatgacaatgagaagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 313 aaattacatgataattgaaacaaattaccaggaaaacatatagatgacaatgagaagcag 254
Query: 361 aggagaagataaaaccgcagcaaatagtttctccaggcatggcttgaatccttggagatg 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 aggagaagataagaccgcagcaaatagtttctccaggcatggcttgaatccttggagatg 194
Query: 421 cttgacaatgtctgggaacactatggctcacatgaagatgattgcatgggtgactactac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 cttgacaatgtctgggaacactatggctcacatgaagatgattgcatgggtgactactac 134
Query: 481 tggcatccagtgggcagggtgcagtgggcatcccacagtggtcagaaagtccctcctcaa 540
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 133 tggcatccagtgggcagggtgcagtgggcatcccgcagtggtcagaaagtccctcctcaa 74
Query: 541 ggaataatctaggacccgagctgaaca 567
|||||||||||||||||||||||||||
Sbjct: 73 ggaataatctaggacccgagctgaaca 47
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space: 533049
Effective search space used: 533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_i19.g1 MSMg01no429_i19.g1 CHROMAT_FILE:
MSMg01no429_i19.g1 PHD_FILE: MSMg01no429_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
(456 letters)
>mm_chr14_78684507_78685362
Length = 856
Score = 835 bits (432), Expect = 0.0
Identities = 450/456 (98%), Gaps = 2/456 (0%)
Strand = Plus / Plus
Query: 1 agtagtgagtttctattatgatgcagaggctcagcccacaagtaagagaatgatacctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtagtgagtttctattatgatgcagaggctcagcccacaagtaagagaatgatacctgg 260
Query: 61 ctcccagtagttttttatttttttt-aagtcagtgtggttaaagtactatatgaaagtct 119
|||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 261 ctcccagtagttttttttttttttttaagtcagtgtgtttaaagtactatatgaaagtct 320
Query: 120 aaaagcttttagaatgccaataattaaaatactgcaggaaacaagtctagatgcataagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaagcttttagaatgccaataattaaaatactgcaggaaacaagtctagatgcataagc 380
Query: 180 cagatgacgattgagtataagaacataggagtagataactgcatatttaacctgcgctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagatgacgattgagtataagaacataggagtagataactgcatatttaacctgcgctcc 440
Query: 240 cttatatgaagcctctaccaagtgaccatgtgcccacccaattcagacgttagctaacaa 299
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caga-atgaagcctctaccaagtgaccatgtgcccacccaattcagacgttagctaacaa 499
Query: 300 aatatcccataaggcagagcctgttgaagctctagtcttgccttggttcagatcatggct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aatatcccataaggcagagcctgttgaagctctagtcttgccttggttcagatcatggct 559
Query: 360 tcaagagcagaccagtcaggatggttagatgaggtaatataggtgaacacccagcccgag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaagagcagaccagtcaggatggttagatgaggtaatataggtgaacacccagcccgag 619
Query: 420 tgcccagtaaacccagatacctggaactaccaacac 455
||||||||||||||||||||||||||||||||||||
Sbjct: 620 tgcccagtaaacccagatacctggaactaccaacac 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
