Query= MSMg01no429_l21.b1 MSMg01no429_l21.b1 CHROMAT_FILE:
MSMg01no429_l21.b1 PHD_FILE: MSMg01no429_l21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:19 2005
(483 letters)
>mm_chr14_79698620_79699502
Length = 883
Score = 859 bits (444), Expect = 0.0
Identities = 471/480 (98%), Gaps = 2/480 (0%)
Strand = Plus / Plus
Query: 5 gaattctctttttgagactcctaaaaa-ataccgtggatctgaaacccctcctggcagaa 63
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctttttgagactcctaaaaacataccgtggatctgaaacccctcctggcagaa 264
Query: 64 ctggtgggtgctgttcgacatcacttcacaaattcagactctaatctagactgaggctgg 123
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 ctggtgggtgctgttcgacatcactgcacaaattcagactctaatctagactgaggctgg 324
Query: 124 ggcttagcaaggagctgtccttgattacagagcatcggggacagacctagccttctcttc 183
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggcttagcaaggagctgaacttgattacagagcatcggggacagacctagccttctcttc 384
Query: 184 tgtggagaagagaatttatacacaatgaaaaatttgttccttgacccagtggaaagaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtggagaagagaatttatacacaatgaaaaatttgttccttgacccagtggaaagaaat 444
Query: 244 atattcaagttacaccacagctatggcgacaaatttccagcgtcaggcttcacttgactg 303
|||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||
Sbjct: 445 atattcaagttacaccacagctgtggagaaaaatttccagcgtcaggcttcacttgactg 504
Query: 304 ctgaaaacaagtgaccaggtcattggcatcaagacgcaaaagttctaaatggaaatgaac 363
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgagaacaagtgaccaggtcattggcatcaagacgcaaaagttctaaatggaaatgaac 564
Query: 364 agctcaccagccctcttccctcccccttcgccccctaagtcacgtggtgatctgtgtagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agctcaccagccctcttccctcccccttcgccccctaagtcacgtggtgatctgtgtagg 624
Query: 424 tggctaaggaaaatcaaaccaagagcttgggtttcagattcaaatcctgacctggatgtc 483
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tggctaaggaaaatcaaacca-gagcttgggtttcagattcaaatcctgacctggatgtc 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space: 412929
Effective search space used: 412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_l21.g1 MSMg01no429_l21.g1 CHROMAT_FILE:
MSMg01no429_l21.g1 PHD_FILE: MSMg01no429_l21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:19 2005
(454 letters)
>mm_chr14_79751961_79752814
Length = 854
Score = 783 bits (405), Expect = 0.0
Identities = 420/425 (98%)
Strand = Plus / Minus
Query: 1 caagaattgaactgataatagaaagtgggctaaaacgggaccaaagactgaaaatgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caagaattgaactgataatagaaagtgggctaaaacgggaccaaagactgaaaatgtttt 366
Query: 61 aataaataatcaaacaaatgtttaaagtaaatatttcaaccaatgacaaaaatataatgc 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 365 cataaataatcaaacaaatgtttaaagtaaatattccaaccaatgacaaaaatataatgc 306
Query: 121 cctacattgaagctaggaagttatatatatattttataaagttcttacacttatctgaac 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct: 305 cctacattgaagctaggaagttatatatattttttataaagttcttacacttacctgaac 246
Query: 181 taacaaatatttgtaacaaatccagggatacctcgctctgtgtatgtctctctgtctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 taacaaatatttgtaacaaatccagggatacctcgctctgtgtatgtctctctgtctctg 186
Query: 241 tctttctgtcttactatgcctcaggctggttttaaactcaaaatcctcctgccttagtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tctttctgtcttactatgcctcaggctggttttaaactcaaaatcctcctgccttagtct 126
Query: 301 cctaggtgctgggctgataggcatgcaccatgtccagtgttgcttgcttttaatagtatg 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 cctaggtgctggactgataggcatgcaccatgtccagtgttgcttgcttttaatagtatg 66
Query: 361 cggcagaggggcggtagagaagtaagagacttgttatgaaactgcaggggcatgagcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cggcagaggggcggtagagaagtaagagacttgttatgaaactgcaggggcatgagcaga 6
Query: 421 ggaac 425
|||||
Sbjct: 5 ggaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
