Query= MSMg01no430_g02.b1 MSMg01no430_g02.b1 CHROMAT_FILE:
MSMg01no430_g02.b1 PHD_FILE: MSMg01no430_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:12 2005
(265 letters)
>mm_chr14_106087718_106088381
Length = 664
Score = 458 bits (237), Expect = e-133
Identities = 255/261 (97%), Gaps = 1/261 (0%)
Strand = Plus / Plus
Query: 5 gaattcacaaaattcacggccctttgcatttttccctgggtatttgcagaatacaaatta 64
|||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaatattca-ggccctttgcatttttccctgggtatttgcagaatacaaatta 263
Query: 65 gtatgtggtaaatacttggtaaaagcatctgtagacatgaacttgtagaacatttcatgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtatgtggtaaatacttggtaaaagcatctgtagacatgaacttgtagaacatttcatgc 323
Query: 125 atttgtgagatacatgttttgtattgagggagaaatggttatgatgttaaaagtaggagt 184
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attggtgagaaacatgttttgtattgagggagaaatggttatgatgttaaaagtaggagt 383
Query: 185 gaagcaaatactattgatcaggtggagcaaaagcagcagcaatcaaaccctctgccagaa 244
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 384 gaagcaaatactattgatcaggtggagcaaaagcagcagcaatcaacccctctgccagaa 443
Query: 245 gaggtgtctgtacgttacaga 265
|||||||||||||||| ||||
Sbjct: 444 gaggtgtctgtacgttgcaga 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 265
Length of database: 664
Length adjustment: 9
Effective length of query: 256
Effective length of database: 655
Effective search space: 167680
Effective search space used: 167680
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_g02.g1 MSMg01no430_g02.g1 CHROMAT_FILE:
MSMg01no430_g02.g1 PHD_FILE: MSMg01no430_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:12 2005
(337 letters)
>mm_chr14_106112286_106113025
Length = 740
Score = 632 bits (327), Expect = 0.0
Identities = 335/339 (98%), Gaps = 3/339 (0%)
Strand = Plus / Minus
Query: 1 ccaggatggtacttaggagctaagggattctctataatctttcacaatt---aggatttc 57
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 539 ccaggatggtacttaggagctaagggattctctataatctttcacaattagaaggatttc 480
Query: 58 tctgtgtcactagccaggtgctttcaccaactattgtgtagagagtgatggaatgtttga 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tctgtgtcactagccaggtgctttcaccaactattgtgtagagagtgatggaatgtttga 420
Query: 118 aatagccaacttgtccaccaatttgttttatagatgaaaaagaaataagacacatagaga 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aatagccaacttgtccaccaatttgttttatagatgaaaaagaaataagacacatagaga 360
Query: 178 tgtataattcaacaacaaagactaaaggcaaaaacttttaacttaatctagtttaaattt 237
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 359 tgtataattcaacaacaaagactaaaggcaaaagcttttaacttaatctagtttaaattt 300
Query: 238 ccttaggaggaaagtcagttttgttagatggcattttccagcagtgcctgattaagtatt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccttaggaggaaagtcagttttgttagatggcattttccagcagtgcctgattaagtatt 240
Query: 298 tttggttttgatttttaaatatcattgtgtttttaggtc 336
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tttggttttgatttttaaatatcattgtgtttttaggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 740
Length adjustment: 9
Effective length of query: 328
Effective length of database: 731
Effective search space: 239768
Effective search space used: 239768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
