Query= MSMg01no430_p10.b1 MSMg01no430_p10.b1 CHROMAT_FILE:
MSMg01no430_p10.b1 PHD_FILE: MSMg01no430_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:04 2005
(263 letters)
>mm_chr14_75876576_75877235
Length = 660
Score = 426 bits (220), Expect = e-124
Identities = 252/266 (94%), Gaps = 9/266 (3%)
Strand = Plus / Minus
Query: 1 attcctaggttttcc-c--tgggaggagtcagggagaacaaaccataccaagtgactgga 57
||||||||| ||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 attcctagg---tccacagtgggaggagtcagggagaacaaaccataccaagtgactgga 420
Query: 58 gggtgaagggcagtgagctgttggctgaagtcacccagcaggcaagggtcctgccatacc 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 419 gggtgaagggcagtgagctgttggctgaagtcacccagcaggcaagggtcctgccatgcc 360
Query: 118 aggcttggtgcagggaccacacttttgttgtttcttttcttttgccattcagttggtagg 177
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aggcttggtgcagggaccatgcttttgttgtttcttttcttttgccattcagttggtag- 301
Query: 178 ctcccccccccaacctctgcacttgtgatgtgctatgtatttgtatgcacgttttgcata 237
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 300 --cccccccccaacctctgcacttgtgatgtgctatttatttgtatgcacattttgcata 243
Query: 238 catgtgggcctatgtgcatgtggatg 263
||||||||||||||||||||||||||
Sbjct: 242 catgtgggcctatgtgcatgtggatg 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 660
Length adjustment: 9
Effective length of query: 254
Effective length of database: 651
Effective search space: 165354
Effective search space used: 165354
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no430_p10.g1 MSMg01no430_p10.g1 CHROMAT_FILE:
MSMg01no430_p10.g1 PHD_FILE: MSMg01no430_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:05 2005
(207 letters)
>mm_chr14_75671953_75672559
Length = 607
Score = 377 bits (195), Expect = e-109
Identities = 204/207 (98%)
Strand = Plus / Plus
Query: 1 tcaaaaatgtcacaacaagatagcattcctttgttaggctcaggctaacagtttgaatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcaaaaatgtcacaacaagatagcattcctttgttaggctcaggctaacagtttgaatga 260
Query: 61 gtatgacagggatctggctggagatgaggactgtgacagagacgggatgctccagcagga 120
||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 gtatgaccgggatctggctggagatggggactgtgacagagacgggatgctccagcagga 320
Query: 121 tgctagatagccttgtccccgtctggttcttttagaatcgaatgtggaggaagaaccgct 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctagatagccttgtccccctctggttcttttagaatcgaatgtggaggaagaaccgct 380
Query: 181 ctgctcacaagaacaaccgctgcgtgg 207
|||||||||||||||||||||||||||
Sbjct: 381 ctgctcacaagaacaaccgctgcgtgg 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 607
Length adjustment: 9
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
