Query= MSMg01no432_o24.b1 MSMg01no432_o24.b1 CHROMAT_FILE:
MSMg01no432_o24.b1 PHD_FILE: MSMg01no432_o24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:52 2005
(213 letters)
>mm_chr14_84153829_84154442
Length = 614
Score = 352 bits (182), Expect = e-102
Identities = 201/208 (96%), Gaps = 5/208 (2%)
Strand = Plus / Plus
Query: 5 gaattctaattcacttcaa--gatgaataggccctgaggaaaccaaactctgaaaattct 62
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaattcaca-caaaagatgaataggccctgaggaaaccaaactctgaaaattct 263
Query: 63 tagctattaagagtatagtcattttcaagacaaagaaaaggatataacagtctaagttct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagctattaagagtatagtcattttcaagacaaagaaaaggatataacagtctaagttct 323
Query: 123 gttcaatatacataagaatgtcaaagtttacctggaaagaaatctaggaaatggaaaatg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gttcaatatacataagaatgtcaaagtttacctggaaagaaatctaggaaatggaaaatg 383
Query: 183 gatagttttttgtttttt-ttgttgttg 209
||||||||||| ||| || |||||||||
Sbjct: 384 gatagtttttt-tttgttgttgttgttg 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 213
Length of database: 614
Length adjustment: 9
Effective length of query: 204
Effective length of database: 605
Effective search space: 123420
Effective search space used: 123420
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no432_o24.g1 MSMg01no432_o24.g1 CHROMAT_FILE:
MSMg01no432_o24.g1 PHD_FILE: MSMg01no432_o24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:52 2005
(413 letters)
>mm_chr14_84311556_84312367
Length = 812
Score = 764 bits (395), Expect = 0.0
Identities = 407/411 (99%), Gaps = 2/411 (0%)
Strand = Plus / Minus
Query: 3 tgttttacaaagaaagaagctgatatacttactgtgacttctgtttaaataagtaatttt 62
||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct: 466 tgttttacaaagaaagaagctgatatatttactgtgacttctgtttaaataagtaa-ttt 408
Query: 63 ttttatcattaaacaacattgctctagttcatataattaagatgctatctaggacctaat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 ttttatcattaaacaacattgctctagttcatataattaagatgctatctaggacctaat 348
Query: 123 gacagtttatgcatctgcctgatatgttgtattcaaaattttgatggtaaacttcttaaa 182
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 347 gacagtttatgcatctgcctgatatgttgtattcaaaagtttgatggtaaacttcttaaa 288
Query: 183 ataggtataaatgttattactgaatattttactgaatttaggaattacataggtgtgaga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ataggtataaatgttattactgaatattttactgaatttaggaattacataggtgtgaga 228
Query: 243 ttaccaacttctagctactatactgtaccgcagaccagcctcagtcagcccccctcaatc 302
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 227 ttaccaacttctagctactatactgtaccgcagaccagcctca-tcagcccccctcaatc 169
Query: 303 ctcaggagaaatcagggttctgtggtatctgaatgtaattttgtcaaagttagcatcaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ctcaggagaaatcagggttctgtggtatctgaatgtaattttgtcaaagttagcatcaga 109
Query: 363 tatatataatacagaagaaaacaaagaagtagggtgtcacaagaggtaagg 413
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tatatataatacagaagaaaacaaagaagtagggtgtcacaagaggtaagg 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 812
Length adjustment: 9
Effective length of query: 404
Effective length of database: 803
Effective search space: 324412
Effective search space used: 324412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
