Query= MSMg01no433_i02.b1 MSMg01no433_i02.b1 CHROMAT_FILE:
MSMg01no433_i02.b1 PHD_FILE: MSMg01no433_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:37 2005
(491 letters)
>mm_chr14_28129364_28130254
Length = 891
Score = 862 bits (446), Expect = 0.0
Identities = 476/486 (97%)
Strand = Plus / Plus
Query: 6 gaattcaacctcctgcttaccagcatgggccaccacacctagctccctttgcattttgaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaacctcctgcttaccagcatgggccaccacacctagctccctttgcattttgaa 265
Query: 66 ttataaaacaacacatccacacatctatagttggaagatgtttcttctcacatgcagcaa 125
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttataaaacaacacacccacacatctatagttggaagatgtttcttctcacatgcagcaa 325
Query: 126 tccctctgtttctcccctgtaaagtcttacatattcatgtgtgttcttgggcacactctc 185
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 tccctctatttctcccctgtaaagtcttatatattcatgtgtgttcttgggcacactctc 385
Query: 186 catttttggtttatattaaacctttgcatttccccatattacttggtgtcataagtgccc 245
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 386 catttttggtttatattaaacctttgcatttccccatatcacttggtgtcataagtgccc 445
Query: 246 ttgtgaatggtctcacagcattcacccagtggatgttctgtcatttaagtaaatggcccc 305
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 446 ttgtgaatggtctcacagaattcacccagtggatgtcctgtcatttaagtaaatggcccc 505
Query: 306 atcaccttccagtgggatttcagggccattgtcacaggagtctgaagccatcccaacctg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atcaccttccagtgggatttcagggccattgtcacaggagtctgaagccatcccaacctg 565
Query: 366 gatttcctgttctgcatcttcctagatgtacaatcttggagacttgctttcttcatccct 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gatttcctgttctgcatcttcctagatgtacaatcttggagacttgctttcttcatccct 625
Query: 426 gccttggtaacaataatactttcctcacagcgttatttataggaaaataatggatagaaa 485
||||||| ||||||||||||||||||| || |||||||| ||||||||||||||||||||
Sbjct: 626 gccttgggaacaataatactttcctcaaagtgttatttagaggaaaataatggatagaaa 685
Query: 486 catttg 491
||||||
Sbjct: 686 catttg 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_i02.g1 MSMg01no433_i02.g1 CHROMAT_FILE:
MSMg01no433_i02.g1 PHD_FILE: MSMg01no433_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:37 2005
(502 letters)
>mm_chr14_28253065_28253965
Length = 901
Score = 874 bits (452), Expect = 0.0
Identities = 470/476 (98%), Gaps = 1/476 (0%)
Strand = Plus / Minus
Query: 27 atgtcaggaggatcactaactattgcctgtaactctagcttcaggagagtcaacacttac 86
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atgtcaggaggatcactaactattgcctgtaactctagcttcaggagagtcaacacttac 642
Query: 87 ccaaactaatgtgcacatactttattaaaaataaggataaatcttaaaaaataaacaagg 146
||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 641 ccaaactaatgcgcacatactttattaaaaataaagataaatcttaaaaaataaacaagg 582
Query: 147 gtatataaagtgaataaagaaacaaattaatgaaataaaataaacaactagtaggatgct 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 gtatataaagtgaataaagaaacaaattaatgaaataaaataaacaactagtaggatgct 522
Query: 207 tagtaggtaaaggcaccaccaccaagactggcaacttgaatacaacattctcactctcct 266
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 521 tagtaagtaaaggcaccaccaccaagactggcaacttgaattcaacattctcactctcct 462
Query: 267 ccccctccatggaaaacagaagaaaagattaccttatccttatcaaaagaataattagaa 326
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 461 ccccctccatggaaaacagaagaaaagattaccttatccttatcaaaagaataattagga 402
Query: 327 aacaaatcacttacaatggaaacagaattatctcacctggtaccgatcaaccatgagaaa 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aacaaatcacttacaatggaaacagaattatctcacctggtaccgatcaaccatgagaaa 342
Query: 387 tgcataagattctgaaagttccttatctaaacgaccatcaaacttcaattctcttctctt 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgcataagattctgaaagttccttatctaaacgaccatcaaacttcaattctcttctctt 282
Query: 447 ttctgtaaactaaaaaaaaaaaaggaaagaaaattaaataaatctgcttaactact 502
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 281 ttctgtaaactaaaaaaaaaaaa-gaaagaaaattaaataaatctgcttaactact 227
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 901
Length adjustment: 10
Effective length of query: 492
Effective length of database: 891
Effective search space: 438372
Effective search space used: 438372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
