Query= MSMg01no433_p16.b1 MSMg01no433_p16.b1 CHROMAT_FILE:
MSMg01no433_p16.b1 PHD_FILE: MSMg01no433_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:14 2005
(476 letters)
>mm_chr14_101483860_101484735
Length = 876
Score = 876 bits (453), Expect = 0.0
Identities = 465/469 (99%), Gaps = 2/469 (0%)
Strand = Plus / Minus
Query: 5 gaattccgaatgtc-tccctccctcccttcttgcctccctcccttccctccttcttacat 63
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gaattccgaatg-catccctccctcccttcttgcctccctcccttccctccttcttacat 667
Query: 64 atcaaacatcatttaacagtatctccactcaagctttgttgggacacactgctgagaatc 123
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 666 atcaaacatcatttaacagtatctccactcaagctttgttgggacacgctgctgagaatc 607
Query: 124 cttatatatttgtcagcaggttcagtttctcgctgttgatggatggtagatccccattta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cttatatatttgtcagcaggttcagtttctcgctgttgatggatggtagatccccattta 547
Query: 184 tcactggatgtacctagaggctcatttattccttactatgtggaatttactgtagggata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcactggatgtacctagaggctcatttattccttactatgtggaatttactgtagggata 487
Query: 244 gttcatgatagtgcagctcctttctgataatgatcagctggcatgaagactaggcaatgg 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 486 gttcatgatagtgcagctcctttctgagaatgatcagctggcatgaagactaggcaatgg 427
Query: 304 agacctttggattgagcttcaacagtgctccaataatagtataaagaaaaaggaaaaaga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 agacctttggattgagcttcaacagtgctccaataatagtataaagaaaaaggaaaaaga 367
Query: 364 cttgtgggcaaacaaagccatacttttatccatgcaaatgatttaacataaactttttgg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cttgtgggcaaacaaagccatacttttatccatgcaaatgatttaacataaactttttgg 307
Query: 424 tctttgtttaaatatgattaggacatttcttacagaaagcaggctttcc 472
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tctttgtttaaatatgattaggacatttcttacagaaagcaggctttcc 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_p16.g1 MSMg01no433_p16.g1 CHROMAT_FILE:
MSMg01no433_p16.g1 PHD_FILE: MSMg01no433_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:14 2005
(569 letters)
>mm_chr14_101334924_101335893
Length = 970
Score = 1064 bits (550), Expect = 0.0
Identities = 565/570 (99%), Gaps = 1/570 (0%)
Strand = Plus / Plus
Query: 1 attcctaaagggtatgcagcctgttcttacagcaacttctattctgccattctcttgtac 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 attcctaaagggtatgcagcctgttcttacagcaacttctattctgccgttctcttgtac 260
Query: 61 cctctcctctccctccccctcccctgtctattcttctcctttcccctcccttccactgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctctcctctccctccccctcccctgtctattcttctcctttcccctcccttccactgcc 320
Query: 121 ctctcctcccttctcctgttttctcctctgcattgccttccatctttccttcctttctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctcctcccttctcctgttttctcctctgcattgccttccatctttccttcctttctcc 380
Query: 181 cctttcttcctctcctttattgcttggtcttgatgggctctcttccccccatcattaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttcttcctctcctttattgcttggtcttgatgggctctcttccccccatcattaaac 440
Query: 241 tatagagaacctaccctacccactctatagctcaccccctcctaatgaacaaaaatgcga 300
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagagagaacctaccctacccactctatagctcaccccctcctaatgaacaaaaatgcga 500
Query: 301 ttctgtgcagttcttg-aacagtactttgtcctttttggttcgagaccctcaaacaatcc 359
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctgtgcagttcttggaacagtactttgtcctttttggttcgagaccctcaaacaatcc 560
Query: 360 acacctcactggacagattcaattttccagactgatgcccttccatttctgcctttctta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acacctcactggacagattcaattttccagactgatgcccttccatttctgcctttctta 620
Query: 420 gctcaatctgttgcatatttgactcctttaaaagacctctttactttttttatcaacatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gctcaatctgttgcatatttgactcctttaaaagacctctttactttttttatcaacatg 680
Query: 480 cacatacacactcaaagaaacacatgccacacatactcaaacatatgtgcacacacacaa 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cacatacacactcaaagaaacacatgccacacatactcaaacatatgtgcacacacacaa 740
Query: 540 tcacaccatgctcacaaacacacacacaca 569
|||||| |||||||||||||||||||||||
Sbjct: 741 tcacactatgctcacaaacacacacacaca 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
