Query= MSMg01no435_b14.b1 MSMg01no435_b14.b1 CHROMAT_FILE:
MSMg01no435_b14.b1 PHD_FILE: MSMg01no435_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:42 2005
(319 letters)
>mm_chr14_122026491_122027209
Length = 719
Score = 518 bits (268), Expect = e-151
Identities = 307/320 (95%), Gaps = 2/320 (0%)
Strand = Plus / Minus
Query: 1 cgatgtcttcaagggatgacacagtttgaccagtcttaatagaggcttgaagttacttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 519 cgatgtcttcaagggatgacacagtttgaccagtcttaatagaggcttgaaattacttgc 460
Query: 61 ctgtcacagccagtgcaagaaaaactacctcacatgctaaagtcatagcattaggattgg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 459 ctgtcacagccagtgcaagaaaaactacctcacatgctaaagtcatagcattaggaatgg 400
Query: 121 tgtttgttttacatattttttaaaatttaagtaacacctttgttgctaaaagcaaaaacg 180
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 399 tgtttgttttacatatttttttaaatttaagtaacacctttgttgctaaaagcaaaaatg 340
Query: 181 ccaactgcaaataaatgaaagaaaattcttaattgcaccttgagtaccacaggtaatgtt 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 339 ccaactgcaaataaatgaaagaaaattcttaagtgcaccttgagtaccacaggtaatgtt 280
Query: 241 ctagcaaatttcctttgagactcatccttggacccggtcactatgg-tatcgtcctctgt 299
|||||||| |||||||||||||||||||||||| ||||||||||| | ||||||| |||
Sbjct: 279 ctagcaaagctcctttgagactcatccttggacctggtcactatggct-tcgtcctgtgt 221
Query: 300 atcggtgggttttctcttag 319
| |||||||||||||||||
Sbjct: 220 tttggtgggttttctcttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 719
Length adjustment: 9
Effective length of query: 310
Effective length of database: 710
Effective search space: 220100
Effective search space used: 220100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_b14.g1 MSMg01no435_b14.g1 CHROMAT_FILE:
MSMg01no435_b14.g1 PHD_FILE: MSMg01no435_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:42 2005
(332 letters)
>mm_chr14_121860956_121861687
Length = 732
Score = 542 bits (280), Expect = e-158
Identities = 319/332 (96%)
Strand = Plus / Plus
Query: 1 acagaactgatggaagattttttctagtggaacccattagagtatatgaactttatttaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 acagaactgatggaagattttttctagtggaacccattagagtatatggactttatttaa 260
Query: 61 ctcaatatggcaaacctggtgtcagtttccaagtaacagaaacctgcagagagtctgtct 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 ctcaatatggcaaacccggtgtcagtttccaagtaacagaaacctgcagagagtctgcct 320
Query: 121 ggtgctactggtgataacactagcagactggtctggtaatgttatttagccagtgactca 180
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgctgctggtgataacgctagcagactggtctggtaatgttatttagccagtgactca 380
Query: 181 aatggacacatattgatagatagctagggagggtcatggtgatgaccattaataaccaag 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 aatggacacatattgatagatagctagggagggtcatggtgatgatcattaataaccaag 440
Query: 241 atatttagaagttcgaagtcatcgtttacacagcaagtttgagggcaacatgggctacat 300
| | ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaactagaagttcccagtcatcgtctacacagcaagtttgagggcaacatgggctacat 500
Query: 301 aagaaactgtctcaaggaccggagagatggct 332
||||||||||||||||||| ||||||||||||
Sbjct: 501 aagaaactgtctcaaggactggagagatggct 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
